Control track and group visibility more selectively below.
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| Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
| Gap |
| Gap Locations |
| GC Percent |
| GC Percent in 5-Base Windows |
| Restr Enzymes |
| Restriction Enzymes from REBASE |
| Scaffolds |
| Assembly Scaffolds |
| Short Match |
| Perfect Matches to Short Sequence () |
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| AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
| Ensembl Genes |
| Ensembl Genes |
| Human Proteins |
| Human Proteins Mapped by Chained tBLASTn |
| tRNA Genes |
| Transfer RNA Genes Identified with tRNAscan-SE |
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| Spliced ESTs |
| Fugu ESTs That Have Been Spliced |
| Fugu ESTs |
| Fugu ESTs Including Unspliced |
| Fugu mRNAs |
| Fugu mRNAs from GenBank |
| Other mRNAs |
| Non-Fugu mRNAs from GenBank |
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| Conservation |
| 5-Way Multiz Alignment & Conservation |
| Tetraodon Chain/Net |
| Tetraodon (Mar. 2007 (Genoscope 8.0/tetNig2)), Chain and Net Alignments |
| Medaka Chain/Net |
| Medaka (Oct. 2005 (NIG/UT MEDAKA1/oryLat2)), Chain and Net Alignments |
| Stickleback Chain/Net |
| Stickleback (Feb. 2006 (Broad/gasAcu1)), Chain and Net Alignments |
| Zebrafish Chain/Net |
| Zebrafish (Jul. 2010 (Zv9/danRer7)), Chain and Net Alignments |
| Chicken Chain/Net |
| Chicken (May 2006 (WUGSC 2.1/galGal3)), Chain and Net Alignments |
| Mouse Chain/Net |
| Mouse (July 2007 (NCBI37/mm9)), Chain and Net Alignments |
| Human Chain/Net |
| Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments |
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| RepeatMasker |
| Repeating Elements by RepeatMasker |
| Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
| Simple Repeats |
| Simple Tandem Repeats by TRF |
| WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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