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Configure Tracks on UCSC Genome Browser: Zebra finch Jul. 2008 (WUGSC 3.2.4/taeGut1)
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Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Quality Scores Zebra finch Sequencing Quality Scores
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
RefSeq Genes RefSeq Genes
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Ensembl Genes Ensembl Genes
Genscan Genes Genscan Gene Predictions
Human Proteins Human Proteins Mapped by Chained tBLASTn
N-SCAN N-SCAN Gene Predictions
Other RefSeq Non-Zebra finch RefSeq Genes
tRNA Genes Transfer RNA Genes Identified with tRNAscan-SE
-   mRNA and EST    
Other mRNAs Non-Zebra finch mRNAs from GenBank
Spliced ESTs Zebra finch ESTs That Have Been Spliced
Zebra finch ESTs Zebra finch ESTs Including Unspliced
Zebra finch mRNAs Zebra finch mRNAs from GenBank
-   Comparative Genomics    
Medium ground finch Chain/Net Medium ground finch (Apr. 2012 (GeoFor_1.0/geoFor1)), Chain and Net Alignments
Chicken Chain/Net Chicken (May 2006 (WUGSC 2.1/galGal3)), Chain and Net Alignments
Turkey Chain/Net Turkey (Dec. 2009 (TGC Turkey_2.01/melGal1)), Chain and Net Alignments
Mouse Chain/Net Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments
Human Chain/Net Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust