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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Contigs |
| Assembly Contigs |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
GC Percent |
| GC Percent in 5-Base Windows |
Restr Enzymes |
| Restriction Enzymes from REBASE |
Short Match |
| Perfect Matches to Short Sequence () |
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RefSeq Genes |
| RefSeq Genes |
Ensembl Genes |
| Ensembl Genes |
Vega Genes |
| Vega v28 Annotations |
Vega Pseudogenes |
| Vega v28 Annotated Pseudogenes |
AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
Human Proteins |
| Human Proteins Mapped by Chained tBLASTn |
Other RefSeq |
| Non-Zebrafish RefSeq Genes |
tRNA Genes |
| Transfer RNA Genes Identified with tRNAscan-SE |
ZGC Genes |
| Zebrafish Gene Collection Full ORF mRNAs |
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Spliced ESTs |
| Zebrafish ESTs That Have Been Spliced |
Zebrafish ESTs |
| Zebrafish ESTs Including Unspliced |
Zebrafish mRNAs |
| Zebrafish mRNAs from GenBank |
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Wild Type Array |
| Zon Lab Expression data for Wild Type Zebrafish |
Affy Zebrafish |
| Alignments of Affymetrix Sequences from Zebrafish Chip |
UMass ChIP-Seq |
| U Mass ChIP-Seq |
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Medaka Chain/Net |
| Medaka (Oct. 2005 (NIG/UT MEDAKA1/oryLat2)), Chain and Net Alignments |
Fugu Chain/Net |
| Fugu (Oct. 2004 (JGI 4.0/fr2)), Chain and Net Alignments |
Tetraodon Chain/Net |
| Tetraodon (Feb. 2004 (Genoscope 7/tetNig1)), Chain and Net Alignments |
Opossum Chain/Net |
| Opossum (Oct. 2006 (Broad/monDom5)), Chain and Net Alignments |
Mouse Chain/Net |
| Mouse (July 2007 (NCBI37/mm9)), Chain and Net Alignments |
Human Chain/Net |
| Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments |
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Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
Simple Repeats |
| Simple Tandem Repeats by TRF |
RepeatMasker |
| Repeating Elements by RepeatMasker |
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