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Configure Tracks on UCSC Genome Browser: Cat Mar. 2006 (Broad/felCat3)
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Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Assembly Assembly from Fragments
Ensembl Assembly Ensembl Gene Scaffold Assembly
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Quality Scores Cat Sequencing Quality Scores
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
RefSeq Genes RefSeq Genes
Ensembl Genes Ensembl Genes
Geneid Genes Geneid Gene Predictions
Genscan Genes Genscan Gene Predictions
Human Proteins Human Proteins Mapped by Chained tBLASTn
N-SCAN N-SCAN Gene Predictions
Other RefSeq Non-Cat RefSeq Genes
SGP Genes SGP Gene Predictions Using Cat/Human Homology
tRNA Genes Transfer RNA Genes Identified with tRNAscan-SE
-   mRNA and EST    
Cat ESTs Cat ESTs Including Unspliced
Cat mRNAs Cat mRNAs from GenBank
Spliced ESTs Cat ESTs That Have Been Spliced
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
-   Comparative Genomics    
Conservation 4 Mammals Multiz Alignment & Conservation
Dog Chain/Net Dog (May 2005 (Broad/canFam2)), Chain and Net Alignments
Mouse Chain/Net Mouse (Feb. 2006 (NCBI36/mm8)), Chain and Net Alignments
Human Chain/Net Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF