Control track and group visibility more selectively below.
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CESAR Gene Annotations |
| Human exons mapped by CESAR |
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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
GC Percent |
| GC Percent in 5-Base Windows |
INSDC |
| Accession at INSDC - International Nucleotide Sequence Database Collaboration |
RefSeq Acc |
| RefSeq Accession |
Restr Enzymes |
| Restriction Enzymes from REBASE |
Short Match |
| Perfect Matches to Short Sequence () |
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RefSeq Genes |
| RefSeq Genes |
AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
Ensembl Genes |
| Ensembl Genes |
Geneid Genes |
| Geneid Gene Predictions |
Genscan Genes |
| Genscan Gene Predictions |
Other RefSeq |
| Non-Cat RefSeq Genes |
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Cat ESTs |
| Cat ESTs Including Unspliced |
Cat mRNAs |
| Cat mRNAs from GenBank |
Other mRNAs |
| Non-Cat mRNAs from GenBank |
Spliced ESTs |
| Cat ESTs That Have Been Spliced |
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CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
Unmasked CpG |
| CpG Islands on All Sequence (Islands < 300 Bases are Light Green) |
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Mouse Chain/Net |
| Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments |
Human Chain/Net |
| Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments |
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RepeatMasker |
| Repeating Elements by RepeatMasker |
Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
Simple Repeats |
| Simple Tandem Repeats by TRF |
WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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