Control track and group visibility more selectively below.
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| Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
| SPARK WES1 pro CNV |
| SPARK WES1 pro CNV |
| proband (inheritance unknown) |
| proband (inheritance unknown) |
| proband (not passing RPKM filter) |
| proband (not passing RPKM filter) |
| proband denovo |
| proband denovo |
| proband inherited |
| proband inherited |
| SPARK WES1 sib CNV |
| SPARK WES1 sib CNV |
| sibling (inheritance unknown) |
| sibling (inheritance unknown) |
| sibling (not passing RPKM filter) |
| sibling (not passing RPKM filter) |
| sibling denovo |
| sibling denovo |
| sibling inherited |
| sibling inherited |
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| C-team Human Diversity Panel WSSD |
| C-team Human Diversity Panel WSSD |
| C-team Human Diversity Panel SUNK |
| C-team Human Diversity Panel SUNK |
| aDNA Genomes WSSD |
| aDNA Genomes WSSD |
| Archaic Genomes WSSD |
| Archaic Genomes WSSD |
| aDNA Genomes SUNK |
| aDNA Genomes SUNK |
| Archaic Genomes SUNK |
| Archaic Genomes SUNK |
| HGDP SUNK |
| HGDP high coverage SUNK |
| African_sunk |
| African_sunk |
| American_sunk |
| American_sunk |
| EastAsian_sunk |
| EastAsian_sunk |
| European_sunk |
| European_sunk |
| Melanesian_sunk |
| Melanesian_sunk |
| MiddleEastern_sunk |
| MiddleEastern_sunk |
| Siberian_sunk |
| Siberian_sunk |
| SouthAsian_sunk |
| SouthAsian_sunk |
| HGDP WSSD |
| HGDP high coverage WSSD |
| African_wssd |
| African_wssd |
| American_wssd |
| American_wssd |
| EastAsian_wssd |
| EastAsian_wssd |
| European_wssd |
| European_wssd |
| Melanesian_wssd |
| Melanesian_wssd |
| MiddleEastern_wssd |
| MiddleEastern_wssd |
| Siberian_wssd |
| Siberian_wssd |
| SouthAsian_wssd |
| SouthAsian_wssd |
| Non-Human Primate WSSD |
| Non-Human Primate WSSD |
| Non-Human Primate SUNK |
| Non-Human Primate SUNK |
| CHM1 hydatidiform mole WSSD |
| CHM1 hydatidiform mole WSSD |
| CHM1 hydatidiform mole SUNK |
| CHM1 hydatidiform mole SUNK |
| SAGE genomes wssd |
| SAGE genomes wssd |
| SSC Genomes WSSD |
| SSC Genomes WSSD |
| BAC library sunk |
| BAC library sunk |
| BAC library wssd |
| BAC library wssd |
| reference sunk |
| reference sunk |
| reference wssd |
| reference wssd |
| SSC Genomes SUNK |
| SSC Genomes SUNK |
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| JASPAR2020 TFBS hg38 |
| TFBS predictions in Homo sapiens (hg38) for all profiles in the JASPAR CORE vertebrates collection (2020) |
| JASPAR2022 TFBS hg38 |
| TFBS predictions in Homo sapiens (hg38) for all profiles in the JASPAR CORE vertebrates collection (2022) |
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| ReMap density |
| ReMap density |
| ReMap 2020 |
| ReMap 2020 test filter |
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| Human methylome studies |
| Human methylome studies |
| SRP304130 |
| Impact of exposures to persistent endocrine disrupting compounds on the sperm methylome in regions associated with neurodevelopmental disorders [Sperm] |
| SRP302514 |
| Integrative multiplatform molecular profiling of human colorectal cancer reveals proteogenomic alterations underlying mitochondrial inactivation [The normal adjacent colorectal mucosa was obtained at a distance of 5 cm from the tumor., The normal adjacent colorectal mucosa was obtained at a distance of 6 cm from the tumor., The normal adjacent colorectal mucosa was obtained at a distance of 7 cm from the tumor., Tumor] |
| SRP056911 |
| DNA methylation in the placentas of typically developing and autistic children [Placenta] |
| SRP299418 |
| cell-free DNA sequencing of plasma [Plasma] |
| SRP298508 |
| Alternative splicing and the epigenome in CML remission [WGBS] [PBMCs] |
| SRP298022 |
| DNA hydroxymethylation analysis for target regions in human smooth muscle cells. [Cultured Smooth Muscle] |
| SRP298020 |
| DNA methylation analysis for target regions in human smooth muscle cells. [Cultured Smooth Muscle] |
| SRP293255 |
| DNA Methylation Potential Energy Landscape Analysis of Pediatric Pre-B cell Acute Lymphoblastic Leukemia (ALL) and Normal B cells and precursors [Cell Line, Primary] |
| SRP047086 |
| A public-private-academic consortium, Genome-in-a-Bottle (GIAB), hosted by NIST to develop reference materials and standards for clinical sequencing [B-Lymphocyte] |
| SRP193431 |
| Early detection of lung cancer by deep methylation sequencing of circulating tumor DNA [Plasma] |
| SRP286409 |
| H3K27me3 shapes DNA methylome by inhibiting UHRF1-mediated H3 ubiquitination [Bisulfite-seq] [E14, HeLa] |
| SRP286271 |
| Homo sapiens Raw sequence reads [Cervical, Cervical Cancer, Cervical Cancer Adjacent] |
| SRP286180 |
| Comprehensive methylome sequencing reveals prognostic epigenetic biomarkers for prostate cancer mortality [Adjacent Normal, Tumour] |
| SRP282493 |
| DNA methylation maintains integrity of higher order genome architecture (WGBS) [Colorectal Cancer Cell Line] |
| SRP278588 |
| DNA methyation of intragenic CpG islands are required for differentiation from iPSC to NPC [Induced Pluripotent Stem Cell, Induced Pluripotent Stem Cell Derived] |
| SRP278376 |
| Epigenetic Landscape of Pediatric Ependymoma Recurrence [Brain] |
| SRP266653 |
| TNF induced inflammatory transcription dynamics and epigenetic changes [HEK 293 transfected with reporter construct, RELA-KO for HEK 293 transfected with reporter construct, TET2 KO for HEK 293 transfected with reporter construct] |
| SRP055494 |
| BLUEPRINT methylome of the HapMap cell line GM18507 (Coriell cell line NA18507) [modified B cell (lymphoblastoid)] |
| SRP273813 |
| Whole genome methylation sequencing of circulating tumor cells (CTCs) in Lung cancer. [Adjacent Normal, Blood, Lung] |
| SRP272635 |
| Decoding dynamic epigenetic landscapes in human oocytes using single-cell multi-omics sequencing [Somatic] |
| SRP272595 |
| WGBS analysis of various colon cancer cell lines [Colorectal Adenocarcinoma] |
| SRP272481 |
| GATA transcription factors, SOX17 and TFAP2C, drive the human germ-cell specification program [Bisulfite-Seq] [iPSC] |
| SRP271639 |
| Cell-free DNA Methylation and Transcriptomic Signature Prediction of Pregnancies with Adverse Outcomes [WGBS] [Plasma] |
| SRP269389 |
| Targeted intragenic demethylation initiates chromatin rewiring for gene activation [HCC cell line] |
| SRP268783 |
| Acute depletion of CTCF rewires genome-wide chromatin accessibility [B Lineage Acute Lymphoblastic Leukemia SEM cell carrying bi-allelic miniAID-mClover3 knockin tags] |
| SRP267967 |
| Characterization of universal features of partially methylated domains across tissues and species [Breast Tumor, Lung] |
| SRP267867 |
| Human ribosomal DNA (rDNA) epigenetic clock [Whole Blood] |
| SRP057098 |
| A Unique Gene Regulatory Network Resets the Human Germline Epigenome for Development [Gonad] |
| SRP052842 |
| Pleiotropic Analysis of Lung Cancer and Blood Triglycerides [purified AT2] |
| SRP266759 |
| DNA methylation repels binding of hypoxia-inducible transcription factors to maintain tumour immunotolerance [BS] [MCF7, SK-MEL-28] |
| SRP266187 |
| Non-CG methylation and multiple epigenetic layers associate child abuse with immune and small GTPase dysregulation [Lateral Amygdala (human brain tissue)] |
| SRP265926 |
| 2-hydroxyglutarate drives whole-genome hypermethylation in kidney cancer cells with inactivated VHL [Cell Line, VHL inactivated clone12, VHL inactivated clone30, VHL inactivated clone44, clone12 exogenous wildtype VHL reintroduced, clone30 exogenous wildtype VHL reintroduced, clone44 exogenous wildtype VHL reintroduced] |
| SRP261643 |
| Comprehensive epigenomic profiling of human alveolar epithelial differentiation identifies key epigenetic states and transcription factor co-regulatory networks for maintenance of distal lung identity [In vitro differentiated AT1-like, purified primary AT2] |
| SRP261501 |
| Tissue-Biased Expansion of DNMT3A-Mutant Clones Associated with Conserved Epigenetic Alterations [Umbilical Cord] |
| SRP260840 |
| Naïve human embryonic stem cells can give rise to cells with trophoblast-like transcriptome and methylome [Bisulfite-Seq] [ESC, Transdifferentiated Human Trophoblast Stem Cell, Trophoblast Stem Cell] |
| SRP259369 |
| Epigenome Dysregulation Resulting from NSD1 mutation in Head and Neck Squamous Cell Carcinoma [Patient-derived head and neck squamous cell carcinoma cell line] |
| SRP259185 |
| Multi-omics analysis reveals divergent epigenetic regulation of gene expression and drivers of esophageal squamous cell carcinoma (WGBS) [Adjacent Normal Esophageal, Esophageal Squamouse Carcinoma] |
| SRP051367 |
| Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (TAB-Seq) [Monocyte-derived dendritic] |
| SRP051366 |
| Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells (Bisulfite-Seq) [Monocyte-derived dendritic] |
| SRP254660 |
| H3K27M in Gliomas Causes a One-step Decrease in H3K27 Methylation and Reduced Spreading Within the Constraints of H3K36 Methylation [WGBS] [Cell Line] |
| SRP253922 |
| Long-term expansion with germline potential of human primordial germ cell-like cells in vitro [Bisulfite-seq] [Ovary, iPSC] |
| SRP253848 |
| LiBis: An ultrasensitive alignment method for low-input bisulfite sequencing [Blood, Tumor] |
| SRP251688 |
| Signalling networks constructed by integrative analysis of multi-omics in peripheral blood mononuclear cells in systemic lupus erythematous patients [PBMCs] |
| SRP250803 |
| Genome-wide R-loop landscapes during epigenetic programming and reprogramming [ESC, Induced Pluripotent Stem Cell, Mesenchymal Stem Cell, Neural Stem Cell, Vascular Endothelial, Vascular Smooth Muscle] |
| SRP246939 |
| Beta cell-specific CD8+ T cells maintain stem-cell memory-associated epigenetic programs during type 1 diabetes (WGBS) [HAART HIV TN CD8 T cells, Polyclonal Naive CD8 T cell HD, Polyclonal T1D Naive CD8 T cells, Polyclonal TCM CD8 T cells, Polyclonal TEM CD8 T cells, Polyclonal TSCM CD8 T cells, Tetramer+ CD8 T cells, Tetramer+ HAART CD8 T cells, Tetramer+ T1D CD8 T cells] |
| SRP049985 |
| Whole Genome Bisulfite Sequencing (WGBS) of cKIT+ sorted cells from 57-137 day old fetal testes and ovaries. [cKIT+ FACS sort] |
| SRP049710 |
| Loss of 5-hydroxymethylcytosine is linked to gene body hypermethylation in kidney cancer [Matched Normal, Tumor] |
| SRP049936 |
| DNA methylation in mammalian placentas [Cerebrum, Cordblood, Extraembryonic Membrane, Placenta, Trophoblasts] |
| SRP049782 |
| Targeted disruption of DNMT1, 3A and 3B in human embryonic stem cells [WGBS] [ES] |
| SRP239226 |
| Principles of Signalling Pathway Modulation for Enhancing Human Naïve Pluripotency Induction [WGBS] [ESC] |
| SRP238023 |
| Reliable tumor detection using cerebrospinal fluid cell-free DNA methylomes in pediatric medulloblastoma [Cerebellum, Cerebrospnial Fluid From Pediatric Medullablastoma Patient, Pediatric Medulloblastoma Tumr, cerebrospnial fluid from Hydrocephalus patient] |
| SRP237955 |
| Molecular atlas of fetal and adult human liver sinusoidal endothelial cells: a F8 secreting cell [methylation III] [Hepatic Sinusoidal Endothelial] |
| SRP230221 |
| Chromatin dynamics reveal circadian control of human in vitro islet maturation [WGBS] [Primary Adult Alpha, Primary Adult Beta, hPSC-derived beta, hPSC-derived definitive endoderm, hPSC-derived endocrine progenitor, hPSC-derived pancreatic progenitor 1, hPSC-derived pancreatic progenitor 2, hPSC-derived poly-hormonal] |
| SRP048896 |
| Genome-wide profiling of the DNA methylation landscape at base-pair resolution in human acute myeloid leukemia cell lines. [AML] |
| SRP048844 |
| Genome-wide profiling of DNA methylation at single-base resolution based on MeDIP-bisulfite high-throughput sequencing and ridge regression (MethyC + MeDIP) [Ovarian Epithelial] |
| SRP048761 |
| Dissecting neural differentiation regulatory networks through epigenetic footprinting [ES-derived neural progenitor] |
| SRP233253 |
| Comparison of EM-seq and WGBS results [B-Lymphocyte, Lung, Plasma] |
| SRP230793 |
| Cord blood DNA methylome in newborns later diagnosed with autism spectrum disorder reflects early dysregulation of neurodevelopmental and X-linked genes [Umbilical Cord Blood] |
| SRP230618 |
| Differential DNA methylation profiles of HS ILAE type 1 in human temporal lobe epilepsy [Brain Hippocampus] |
| SRP229996 |
| Stem and effector CD8 T-cells from human cancers [Blood, Kidney Tumor] |
| SRP226234 |
| An ExtendedCulture System that Supports Human Primordial Germ Cell-Like Cells Survival and Initiation of DNA Methylation Erasure [hESCs] |
| SRP224808 |
| Whole genome bisulfite sequencing of human spermatozoa reveals differentially methylated patterns from type 2 diabetic patients [Semen] |
| SRP045902 |
| Resetting Transcription Factor Control Circuitry Towards Ground State Pluripotency In Human [ESC] |
| SRP223055 |
| Tibetan humans Raw sequence reads [Blood] |
| SRP223612 |
| Whole Genome Bisulfite sequencing: Allele-specific DNA methylation is increased in cancers and its dense mapping in normal plus neoplastic cells increases the yield of disease-associated regulatory SNPs [Bladder Cell Line, Blood, Bone Marrow, Brain, Breast (Primary Tissue), Breast Cell Line, Cell Line, Liver, Lymph Node, Placenta, Placenta Maternal] |
| SRP221227 |
| Persistent epigenetic memory impedes rescue of the telomeric phenotype in human ICF iPSCs following DNMT3B correction [iPSCs] |
| SRP220230 |
| Human, Chimpanzee, Gorilla, Orangutan, Macaque Epigenomics [LCL] |
| SRP220467 |
| Human embryonic stem cell-derived organoidal retinoblastoma reveals cancerous origin and therapeutic target [Retina, hESC] |
| SRP219798 |
| Regulation of DNA Methylation at Enhancers by TET2 Finetunes Gene Transcription in ERa-Positive Breast Cancer Cells [MCF7] |
| SRP045269 |
| Global loss of DNA methylation uncovers intronic enhancers in genes [Colorectal Cancer Cell Line] |
| SRP217135 |
| Systematic evaluation of library preparation methods and sequencing platforms for high-throughput whole genome bisulfite sequencing [WGBS] [White Blood, Whole Blood] |
| SRP217139 |
| Lactate mediated epigenetic reprogramming during cancer associated fibroblast formation [CAF, MSC] |
| SRP215940 |
| The DNA methylomes of hyper-IgM syndrome type 2 B cells provide insights into the roles of activation-induced deaminase prior to the germinal center reaction [Non-Class-Switched Memory B Cells, naive B cell] |
| SRP213665 |
| The strand-biased mitochondrial DNA methylome and its regulation by DNMT3A [HEK293T_WGBS] [HEK293T] |
| SRP213117 |
| Single-cell transcriptome analysis of uniparental embryos reveals parent-of-origin effects on human preimplantation development [methylation] [Embryo] |
| SRP043461 |
| The effects of the global loss of DNA methylation on the functional cancer epigenome (Bisulfite-seq) [DKO1, HCT116] |
| SRP198282 |
| Hammer-seq to measure kinetics of DNA methylation maintenance in HeLa cells [Cervix, Inner Cell Mass] |
| SRP199200 |
| CATACOMB: an endogenous inducible gene that antagonizes H3K27 methylation activity of Polycomb Repressive complex 2 via a H3K27M-like mechanism [HEK-293T] |
| SRP193843 |
| DNMT1 drives 4D genome rewiring during oncogene induced senescence [WI-38hTERT/GFP-RAF1-ER] |
| SRP198624 |
| Whole genome bisulfite sequencing of esophagus squamous cell carcinoma [Esophagus] |
| SRP194341 |
| Whole-exome, transcriptome and epigenome data for homo sapiens from normal to dysplasia to colorectal cancer [Colon] |
| SRP021039 |
| Selective demethylation and altered gene expression are associated with ICF Syndrome in human induced pluripotent stem cells and mesenchymal stem cells [Induced Pluripotent Stem Cell] |
| SRP065930 |
| HX1 [Blood] |
| SRP193115 |
| ATAC-Me captures spatiotemporal dynamics of DNA methylation across the chromatin accessible genome [THP-1 Monocyte] |
| SRP192966 |
| Gene expression, methylome and splicing of THP-1 monocytic cells and THP-1-derived macrophage [Monocytic Cell Line] |
| SRP028804 |
| The DNA methylation landscape of human early embryos [Embryo] |
| SRP187153 |
| Comparison of methylome data generated with HiSeq X Ten and NovaSeq [IMR-90] |
| SRP041984 |
| Epigenetic and transcriptional aberrations in human pluripotent stem cells reflect differences in reprogramming mechanisms [Fibroblast, Pluripotent] |
| SRP186642 |
| Genome-wide methyl-cytosine competition by DNMT and TET [ESC, EpiSCs, In Vitro Derived Motor Neurons] |
| SRP041828 |
| Comparison of nucleosome occupancy and chromatin states between normal and cancer cell lines [HMEC, MCF7, PC3, PrEC] |
| SRP041822 |
| Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels [Bisulfite-Seq] [Lymphoblastoid Cell Line] |
| SRP186275 |
| Bisulfite-seq profiling of the human neutrophil genome during PMA- and E. coli encounter-induced activation [Peripheral Blood] |
| SRP186015 |
| Study of DNA methylation pattern in single basepair resolution in the human dopaminergic neurons [LUHMES-derived neurons] |
| SRP185639 |
| DNMT3B has oncogenic activity but evidence suggests that it does not promote CIMP nor cooperate with activated BRAFV600E in human intestinal cancer. (WGBS) [Fetal Lung Fibroblasts] |
| SRP041720 |
| Genome-wide profiling of the DNA methylation landscape at base-pair resolution in human neurological disorders (Bisulfite-Seq) [brain Grey matter] |
| SRP041718 |
| Genome-wide DNA hypomethylation and RNA:DNA hybrid accumulation in Aicardi-Goutières syndrome [Primary] |
| SRP125992 |
| Activation of neuronal genes via LINE-1 elements upon global DNA demethylation in human neural progenitors [Fetal-Derived Neural Progenitor Cells (Sai)] |
| SRP175163 |
| Loss of hydroxymethylcytosine is an independent adverse prognostic factor in clear cell Renal Cell Carcinoma (ccRCC) and can be abrogated by ascorbic acid mediated TET activation [786-O] |
| SRP174219 |
| Replication timing and epigenome remodelling are associated with the nature of chromosomal rearrangements in cancer [Bisulfite-Seq] [Breast] |
| SRP041025 |
| WGBS data of pediatric B-cell acute leukemias [Bone Marrow / Peripheral Blood] |
| SRP170543 |
| Impaired DNA methylation in oocytes with a mutation in KHDC3L causing recurrent hydatidiform mole [embryo day 6] |
| SRP168427 |
| Tet inactivation disrupts YY1 binding and long-range chromatin interactions to cause developmental defects in embryonic heart [Embryonic Heart] |
| SRP167041 |
| Homo sapiens Epigenomics [Breast, Plasma] |
| SRP163251 |
| Rates of acquisition of de novo mutations in human pluripotent stem cells under different culture conditions [PSC] |
| SRP162996 |
| Very long intergenic non-coding RNA transcripts and expression profiles are associated to specific childhood acute lymphoblastic leukemia subtypes [CD10+ CD19+ Cord blood, Pre-B t(12 21) [ETV6-RUNX1] acute lymphoblastic leukemia] |
| SRP038103 |
| Genome-wide methylation maps for untreated and Aza treated AML3 cells [AML3] |
| SRP037971 |
| Genome wide profiling of MBD2 binding [MCF-7 WT] |
| SRP161783 |
| Whole Genome Bisulfite Sequencing of Rett Syndrome and Control Human BA9 Cortex [Brain] |
| SRP161745 |
| Human retinal pigment epithelium [Cultured Retinal Pigment Epithelum, Eye] |
| SRP158940 |
| N6-methyladenine DNA Modification in Glioblastoma [ChIP-seq, BiSulfite-seq, DIP-seq] [Patient Derived Glioblastoma Stem Cell] |
| SRP158895 |
| Comparison of methylome data obtained with rPBAT and tPBAT. [Lung] |
| SRP158894 |
| Optimization of the input amount of library for whole-genome bisulfite sequencing on HiSeq X Ten [Lung] |
| SRP158409 |
| H3K36me2 recruits DNMT3A and shapes intergenic DNA methylation landscapes [C3H embryo-derived mesenchymal progenitor, C57BL/6 x 129S4/SvJae F1 embryo-derived ESCs, Patient-derived head and neck squamous cell carcinoma cell line] |
| SRP158279 |
| Epigenetic reprogramming at estrogen-receptor binding sites alters the 3D chromatin landscape in endocrine resistant breast cancer [WGBS] [Breast Cancer] |
| SRP156136 |
| MethMotif: An integrative cell specific database of transcription factor binding motifs coupled with DNA methylation profiles [Colon, Spleen] |
| SRP035642 |
| The relationship between DNA methylation, genetic and expression inter-individual variation in untransformed human fibroblasts [Whole genome bisulfite sequencing] [Skin] |
| SRP155006 |
| Epigenomic signatures in liver and blood of Wilson disease patients include hypermethylation of liver-specific enhancers [Liver, Whole Blood] |
| SRP151496 |
| Generation of FOXO3 engineered human stem cells with enhanced efficacy and safety [ECs, MSCs, TransMSCs, VSMCs] |
| SRP136499 |
| A genomic study of the contribution of DNA methylation to regulatory evolution in primates [Heart, Heart (Later Reclassified As Liver), Kidney, Liver, Lung] |
| SRP148683 |
| Comparison of transcriptome profiles of human embryo cultured in either closed or standard incubator [Preimplantation Embryo] |
| SRP126139 |
| G-quadruplex structures moulds the DNA methylome [Cell Line] |
| SRP144312 |
| Widespread transposable element-driven oncogene expression in cancers [Lung Cancer Cell Line] |
| SRP144098 |
| DNMT3B maintains mCA landscape and regulates mCG status of bivalent promoters in human embryonic stem cells [ESC] |
| SRP117084 |
| Transcription elongation regulates genome 3D structure [monocyte derived macrophages (MDM)] |
| SRP033504 |
| Epigenome analysis of human epidermal samples with aging and sun exposure [Dermis] |
| SRP033491 |
| China_type_2_diebetes_family |
| SRP033283 |
| The RON receptor tyrosine kinase promotes metastasis by triggering epigenetic reprogramming through the thymine glycosylase MBD4 (Bisulfite-Seq) [Breast Cancer Cell Line] |
| SRP033252 |
| Genome-wide profiling of the functional DNA methylation landscape at base-pair resolution in human cancer types [BS-seq] [Blood (B-cells), Brain, Brain (grey matter), Brain (white matter), Breast, Colon, Liver, Lung, Placenta, Prostate] |
| SRP033201 |
| Homo sapiens Genome sequencing |
| SRP133999 |
| Developmental origins define epigenomic differences between subcutaneous and visceral adipocytes [Bisulfite-Seq] [Blood, Subcutaneous Adipose, Visceral Adipose] |
| SRP133941 |
| Longitudinal Personal DNA Methylome Dynamics in a Human with a Chronic Condition [Peripheral Blood Mononuclear Cells] |
| SRP133910 |
| Homo sapiens Raw sequence reads [Blood, Peripheral Blood] |
| SRP032354 |
| whole-genome bisulfite sequencing (BS-seq) of HEK293 cells (HEK293-CT) and HEK293 cells stably over-expressing the BAHD1 gene (HEK-BAHD1) [Embryonic Semi-Differentiated Kidley, modified HEK293 cell overexpressing BAHD1] |
| SRP132785 |
| Active BRAF-V600E is the key player in generation of a sessile serrated polyp-specific DNA methylation profile (WGBS data set) [Blood, Colon] |
| SRP132292 |
| Genetic determinants and epigenetic effects of pioneer factor binding [WGBS] [immortalized BJ foreskin fibroblast cell line] |
| SRP131900 |
| Lymphocyte-specific chromatin accessibility pre-determines glucocorticoid resistance in acute lymphoblastic leukemia [WGBS] [ALL xenograft cells] |
| SRP131790 |
| Whole Genome Bisulfite Sequencing of Autism and Control Human BA9 Cortex [Dorsal Lateral Prefrontal Cortex] |
| SRP131112 |
| Endurance training remodels sperm-borne small RNA expression and methylation at neurological gene hotspots [RRBS] [Semen] |
| SRP131087 |
| An epigenomic approach to identifying differential overlapping and cis-acting lncRNAs in cisplatin-resistant cancer cells [BiSulfite-seq] [Lung, Ovarian] |
| SRP130992 |
| Genome-wide Methylation in Cordblood CD4+ Cells from Newborns Exposed vs. Unexposed to Maternal Tobacco Smoke During Pregnancy [Cord blood CD4+] |
| SRP130768 |
| Homo sapiens bisulfite and mRNA sequencing of blood T cells and LCM collected lung cells [Blood, Lung] |
| SRP128919 |
| DNA methylation in hESC derived brain organoids and iPSC derived neurons, astrocytes and neural progenitors [Whole Organoid] |
| SRP127667 |
| Epigenetic marks and nuclear transcriptomes of cardiac myocytes [Heart Left Ventricle] |
| SRP127273 |
| Scalable and efficient single-cell DNA methylation sequencing by combinatorial indexing. [Embryonic Kidney Blood Skin] |
| SRP126972 |
| Distinct Epigenetic Subtypes Are Linked to Disease Progression in Low-Risk MDS [Peripheral blood (PB)] |
| SRP126677 |
| Genome-wide profiling at single-nucleotide resolution of brain cell types in schizophrenia [WGBS] [Brain] |
| SRP029519 |
| Induction of sarcomas by mutant IDH2 [10T isogenic cell line with IDH2 mutation] |
| SRP125973 |
| A modular dCas9-SunTag DNMT3A epigenome editing system overcomes pervasive off-target activity of direct fusion dCas9-DNMT3A constructs [Cervical Cancer Cell Line] |
| SRP125826 |
| Intervals of unmethylated DNA spatially co-segregate in cis and in trans [WGBS] [Erythroid Progenitor Cells] |
| SRP028600 |
| Charting a dynamic DNA methylation landscape of the human genome [Cell Line, Cortex, Primary, Primary Tumor] |
| SRP028577 |
| Large-scale hypomethylated blocks associated with Epstein-Barr virus-induced B-cell immortalization [Bisulfite-seq] [Activated B-cells, Activated B-cells day 16, Activated B-cells week 3, EBV transformed B-cells, EBV transformed B-cells 16 days post infection, EBV transformed B-cells 3 weeks post infection, Resting B-cells] |
| SRP113417 |
| Chromatin and Transcriptional Dynamics in Adult Germline Stem Cells and Mammalian Spermatogenesis [Spermatogonia (Thy1+), Testis] |
| SRP119706 |
| DNA hypermethylation encroachment at CpG island borders in cancer is predisposed by H3K4 monomethylation [WGBS_Hs] [Adjacent Benign Normal Prostate, Prostate Tumor] |
| SRP026604 |
| Genome-wide methylation maps for Proliferating and Senescent cells [IMR-90] |
| SRP117159 |
| Homo sapiens cultivar:PLC/PRF/5 Raw sequence reads [Liver] |
| SRP074598 |
| Single Cell DNA Methylome Sequencing of Human Preimplantation Embryos [Heart, ICM, Sperm, TE, Villus] |
| SRP116948 |
| Whole genome bisulphite sequencing using the Illumina X system [Bisulfite-Seq] [EBV-transformed lymphoblastoid cell line, Fetal Lung Fibroblast] |
| SRP124518 |
| UBE3A-mediated regulation of imprinted genes and epigenome-wide marks in human neurons [Neuronal Cell Line, chromosome duplication model of Dup15q syndrome] |
| SRP115074 |
| Lack of Repressive Capacity of Human Promoter DNA Methylation identified through Genome-Wide Epigenomic Manipulation [Brest Cancer Cell Line] |
| SRP026048 |
| Global epigenomic reconfiguration during mammalian brain development [Brain (Cerebral Cortex), Brain (Dorsal Prefrontal Cortex), Brain (Frontal Cortex), Brain (Middle Frontal Gyrus), ESC] |
| SRP580181 |
| Dynamic Multi-omics Profiling Unveils Bimodal Epigenetic Roles of Chromatin O-GlcNAc modification in Premature Senescence Program [BiSulfite-seq] [Primary Fibroblasts] |
| SRP107883 |
| Archaic and modern bone DNA methylation maps from the Neanderthal, Denisovan, modern human and chimpanzee [Bone] |
| SRP107857 |
| TRIM28-Regulated Transposon Repression Is Required for Human Germline Competency and Not Primed or Naive Human Pluripotency [naive ESC, primed ESC] |
| SRP576746 |
| CD19-CAR T cells undergo exhaustion epigenetic programming in patients with acute lymphoblastic leukemia [CD8+ T Cells] |
| SRP574020 |
| Silencing TET1 expression alters the epigenomic landscape and amplifies transcriptomic responses to allergen in airway epithelial cells [Bronchial Epithelial] |
| SRP106910 |
| Human memory CD8 T-cell effector-potential is epigenetically preserved during in vivo homeostasis [HuTCM, HuTEM, HuTN, HuTSCM, TCMD204, TEMD203, TND201, TSD202] |
| SRP022182 |
| Homo sapiens Epigenomics |
| SRP022160 |
| Whole-genome analysis of 5-hydroxymethylcytosines and 5-methylcytosines at base resolution in human brain [Brain Prefrontal Cortex] |
| SRP022149 |
| Genome-wide parent-of-origin DNA methylation analysis [Methyl-seq] [Normal Brain, Normal Liver, Normal Placenta] |
| SRP104789 |
| Culture of Human embryonic stem cells in different media [ESC] |
| SRP104305 |
| 5hmC dynamically correlated with enhancer''s activities during hES-to-Pancreatic endoderm cell differentiation (Bisulfite-Seq) [ES Cells] |
| SRP559414 |
| The myoblast methylome: Multiple types of associations with chromatin and transcription [Skeletal Muscle] |
| SRP104141 |
| NicE-seq: high resolution open chromatin profiling [Colorectal] |
| SRP103943 |
| DNA epigenome editing using CRISPR-Cas SunTag-directed DNMT3A [WGBS] [epithelial HEK 293T cells] |
| SRP103839 |
| Single-cell Multi-omics Sequencing and Analyses of Human Colorectal Cancer [CRC, HeLa contaminant] |
| SRP022041 |
| Buccals are likely to be a more informative surrogate tissue than blood for epigenome-wide association studies [Bisulfite-Seq] [Normal Buccal Cells] |
| SRP103794 |
| Methylation DNA mediated KLF4 binding activity in glioblastoma cells [Brain] |
| SRP021846 |
| Age-related methylation changes are associated with altered transcriptional circuitry [Methyl-seq] [Skin (Epidermal Suction Blister Samples)] |
| SRP021479 |
| Genome-wide DNA methylation aberrations in human atherosclerosis (sequencing) [Carotid] |
| SRP103077 |
| Mapping DNA methylation and CTCF/cohesin occupancy on nascent chromatin and DNMT-targeted nascent chromatin [ESC] |
| SRP551562 |
| DNA Methylation Profiling at Base-Pair Resolution Reveals Unique Epigenetic Features of Early-Onset Colorectal Cancer in Underrepresented Populations [Moderately Differentiated Rectal Adenocarcinoma, Moderately Differentiated Rectosigmoid Adenocarcinoma, Moderately Differentiated Sigmoid Colon Cancer, Normal Adjacent Colonic Mucosal, Normal Adjacent Rectal, Normal Adjacent Rectosigmoid, Normal Adjacent Sigmoid, Rectal Adenocarcinoma Arising From Tubulovillous Adenoma With High Grade Dysplasia] |
| SRP551395 |
| Clonorchis sinensis infection alters the methylation and hydroxymethylation of hepatocellular carcinoma [HCC adjacent, HCC tumor] |
| SRP102997 |
| Genome-wide nucleosome occupancy and DNA methylation profiling in endometriosis cells [hTERT immortalized endometriosis] |
| SRP543819 |
| Seminal Plasma cell-free DNA [Seminal Plasma] |
| SRP101887 |
| Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric trait heritability [Bisulfite-Seq] [anterior cingulate cortex (BA24), hippocampus (HC), nucleus accumbens (NAcc), prefrontal cortex (BA9)] |
| SRP536371 |
| DNA methylation protects cancer cells against non-canonical senescence [Colon] |
| SRP338680 |
| Molecular profile of HepG2 cell line (IBMC) [Liver] |
| SRP533334 |
| Methylation patterns of the nasal epigenome of hospitalized SARS-CoV-2 positive patients reveal insights into molecular mechanisms of COVID-19 [Nasopharyngeal Swab] |
| SRP531388 |
| Inferring DNA methylation in non-skeletal tissues of ancient specimens [Bone (Femur)] |
| SRP526881 |
| Total plasma cfDNA methylation in kidney transplant recipients provides insight into acute allograft rejection pathophysiology [Plasma] |
| SRP526064 |
| Valine-restricted diet regulates DNA methylation [Bisulfite-Seq] [HCT116] |
| SRP100067 |
| Epigenome-wide analysis of DNA methylation in lung tissue shows concordance with blood studies and identifies tobacco smoke-inducible enhancers [purified primary alveolar epithelial type 2] |
| SRP525370 |
| Bulk whole genome bisulfite sequencing from benign human Fallopian tube [Fallopian Tube] |
| SRP525209 |
| Methylation changes induced by alpha-hemolysin from Staphylococcus aureus in human primary Th1 lymphocytes [Lymphocyte] |
| SRP099603 |
| Enrichment methods provide a feasible approach to comprehensive and adequately powered investigations of the methylome [Postmortem Brain] |
| SRP523753 |
| Vitamin C promotes epidermal proliferation by enhancing the DNA demethylation of proliferation-related genes in human epidermal equivalents (WGBS) [Epidermal Equivalent] |
| SRP523710 |
| Rapid Human Oogonia-like Cell Specification via Combinatorial Transcription Factor-Directed Differentiation [BiSulfite-seq] [DDX4+ induced oogonia-like, DDX4+ induced oogonia-like cells (no DNMT1i), DDX4+ induced oogonia-like cells naive reset, hPGCLC, hiPSC naivereset, hiPSC primed] |
| SRP521389 |
| Bisulfite-Free Whole-Genome Mapping of 5-Methylcytosine at Single-Base Resolution by TAD-seq [Cell Line] |
| SRP521100 |
| Continuous turnover and asynchronous aging of human memory T cells across tissues [Jejunum, Lung, Mesenteric Lymph Node, Spleen] |
| SRP098648 |
| Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA [BiSulfite-seq] [Adult Brain Frontal Lobe, LNCaP clone] |
| SRP519334 |
| sciMETv3 Single-cell DNA Methylation Raw Sequence Reads [BA46] |
| SRP097759 |
| S-adenosylhomocysteine hydrolase participates in DNA methylation inheritance [Kidney] |
| SRP516302 |
| Modulating immune cell fate and inflammation through CRISPR-mediated DNA methylation editing [WGBS-seq] [B-ALL cell line] |
| SRP510797 |
| Homo sapiens Raw sequence reads [Kidney] |
| SRP515825 |
| Mitochondria-localized MBD2c facilitates mtDNA transcription and drug resistance [Bisulfite-Seq] [MDA-MB-468] |
| SRP515320 |
| Epigenetic dysregulation of transposable elements in cognitive impairment and Alzheimer's disease [Isolated WBC] |
| SRP478956 |
| Divergent originations of parental DNA hydroxymethylation in human preimplantation embryos [ESC] |
| SRP514328 |
| DNA 5-methylcytosine regulates genome-wide formation of G-quadruplex structures [WGBS] [Embryonic Kidney] |
| SRP019232 |
| Whole genome bisulfite-seq of two healthy males. [Hair Follicle, Peripheral Blood Lymphocyte] |
| SRP001371 |
| University of Washington Human Reference Epigenome Mapping Project [Fetal Intestine Large, Fetal Intestine Small] |
| SRP511776 |
| Patient TSC2 Mutant Cells Exhibit Aberrations in Early Neurodevelopment Accompanied by Changes in the DNA Methylome (Bisulfite-Seq) [iPSC-derived neural progenitor, induced pluripotent stem cells (iPSC)] |
| SRP511377 |
| Bisulfite seq of UHRF1 KO A549 cells [Tumor] |
| SRP510877 |
| High-Resolution Molecular Profiling of Epileptic Brain Activity via Explanted Depth Electrodes [Methylation] [Brain] |
| SRP510686 |
| A comparison of methylome data produced with tPBAT and sPBAT library preparation protocols. [IMR-90 (JCRB9054)] |
| SRP510440 |
| Tracking and mitigating imprint erasure during induction of naïve human pluripotency at single-cell resolution [Bisulfite-Seq] [hESC] |
| SRP096028 |
| Dental Pulp Stem Cells Model Early Life and Imprinted DNA Methylation Patterns. [Dental Pulp Stem Cell, Luhmes] |
| SRP508090 |
| Epigenomic landscape of human cumulus cells in premature ovarian insufficiency using single-base resolution methylome and hydroxymethylome. [scWGBS_seq] [Ovary] |
| SRP504847 |
| Ectopic expression of DNMT3L in human trophoblast stem cells restores features of the placental methylome [PBAT BS-Seq] [Trophoblast Stem Cell] |
| SRP504674 |
| Generation of human spermatogonia from pluripotent stem cells [PGCLCs, xrTestis] |
| SRP504106 |
| Mutant IDH1 inhibition induces reverse transcriptase and dsDNA sensing to activate tumor immunity [human WGBS] [Cholangiocarcinoma] |
| SRP503688 |
| Genome-wide DNA methylation seq data and RNA seq data in three paired HCC and normal tissue samples [HCC, Paracancerous] |
| SRP501436 |
| Transcriptomic and epigenomic consequences of heterozygous loss-of-function mutations in AKAP11, a shared risk gene for bipolar disorder and schizophrenia [WGBS] [iPSCs were derived from lymphoblasts] |
| SRP500704 |
| Bisulfite-Free Whole-Genome Mapping of 5-Methylcytosine at Single-Base Resolution by NTD-seq [Cell Line] |
| SRP095006 |
| Genome-wide determination of on-target and off-target characteristics for RNA-guided DNA Methylation by dCas9 methyltransferases (CRISPRme) [WGBS] [Embryonic Kidney Cell Line] |
| SRP094960 |
| Genomic profiling of human spermatogonial stem cells [WGBS] [Testis] |
| SRP499337 |
| Repetitive element transcript accumulation is related to inflammaging in humans [PBMC] |
| SRP094721 |
| Epigenomic landscapes of hESC-derived neural rosettes [Neural Stem Cell] |
| SRP496763 |
| Charting the regulatory landscape of TP53 on transposable elements in cancer [WGBS] [A549, HCT116, RKO] |
| SRP094554 |
| A Molecular signature for Delayed Graft Function [BS-Seq] [Kidney] |
| SRP434804 |
| MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons [WGBS] [Neuron] |
| SRP494617 |
| methylGrapher: Genome-Graph-Based Processing of DNA Methylation Data from Whole Genome Bisulfite Sequencing [1000 Genomes LCL] |
| SRP494242 |
| Methylation changes induced by alpha-hemolysin from Staphylococcus aureus in human primary Th17 lymphocytes. [Lymphocyte] |
| SRP491820 |
| Cell-free DNA Methylation Patterns in Aging and Their Association with Inflamm-aging [Plasma] |
| SRP093764 |
| Epigenetic resetting of human pluripotency [ESC] |
| SRP490212 |
| UHRF1 ubiquitin ligase activity supports the maintenance of low-density CpG methylation [BiSulfite-seq] [Colorectal Carcinoma epithelial] |
| SRP490076 |
| Persistent epigenome anomalies in induced pluripotent stem cells from late-onset sporadic Alzheimer's disease cases [BiSulfite-seq] [iPSC] |
| SRP093254 |
| Whole Genome Bisulfite Sequencing of HUES8 WT and HUES8 TET1/2/3 TKO hESCs [ESC] |
| SRP485412 |
| PRC2-AgeIndex: a universal biomarker of aging and rejuvenation [WGBS] [Dermal Fibroblasts, Foreskin Fibroblasts] |
| SRP092462 |
| HUES8 TET1/2/3 TKO hESCs [ESC] |
| SRP473783 |
| scNanoSeq-CUT&Tag: a long-read single-cell CUT&Tag sequencing method for efficient chromatin modification profiling within individual cells [Blood] |
| SRP092113 |
| Splinted Ligation Adapter Tagging, a novel library preparation for whole genome bisulphite sequencing [ALL cell line, Lymphoblastoid Cell Line] |
| SRP474233 |
| Identification of differentially expressed tumour-related genes regulated by UHRF1 regulated DNA methylation [WGBS] [Mammary Gland] |
| SRP470181 |
| Hypermethylation of DNA impairs megakaryogenesis in delayed platelet recovery after allogeneic hematopoietic stem cell transplantation [Bone Marrow] |
| SRP467414 |
| DNA methylation profiling identifies TBKBP1 as potent amplifier of cytotoxic activity in CMV-specific human CD8+ T cells [Peripheral Blood] |
| SRP464400 |
| Epigenetic signature of human vitamin D3 and IL-10-conditioned regulatory DCs [Leukapheresis Products] |
| SRP464289 |
| DNMT3B PWWP mutations cause hypermethylation of heterochromatin (WGBS) [Colorectal Cancer Cell Line] |
| SRP462543 |
| iPSC-based modeling of preeclampsia identifies defects in extravillous trophoblast differentiation [Mesenchymal Stem Cell, Placenta, iPSC derived extravillous trophoblast, iPSC derived trophoblast stem cell, iPSC reprogrammed from renal epithelial, iSPC reprogrammed from mesenchymal stem cell] |
| SRP461724 |
| Endogenous retrovirus LTR12C hold potential locus-dependent activities as promoter and/or enhancer [BiSulfite-seq] [Embryonic Kidney] |
| SRP461642 |
| Whole genome bisulfite sequencing identifies stage- and subtype-specific DNA methylation signatures in pancreatic cancer [Normal Pancreatic Ductal Mouse Organoid, Normal Pancreatic Ductal Patient-Derived Organoid, PanIN mouse organoid, Pancreatic Ductal Adenocarcinoma Mouse Organoid, Pancreatic Ductal Adenocarcinoma Patient-Derived Organoid] |
| SRP090105 |
| The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis [WGBS_Hs] [Retina] |
| SRP089722 |
| Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling [WGBS] [primary prostate epithelial cells (PrEC), prostate cancer cell line (LNCaP)] |
| SRP456514 |
| A modular dCas9-based recruitment platform for combinatorial epigenome editing [Embyonic Kidney] |
| SRP454277 |
| Characterisation and reproducibility of the HumanMethylationEPIC v2.0 BeadChip for DNA methylation profiling [WGBS] [Prostate Tumour] |
| SRP452335 |
| Epigenetic sequencing of allogeneic HSC-derived CAR-engineered NKT cells [BCAR-iNKT, BCAR-iNKT-IL15, Bcar-T] |
| SRP451599 |
| The effect of Histone H3.3 knockdown on DNA methylation in HepG2 cells [Hepatoma] |
| SRP450683 |
| Epigenomic landscape of colorectal adenoma and cancer [Colorectal] |
| SRP450395 |
| Epigenetic therapy targets the 3D epigenome in endocrine-resistant breast cancer [WGBS] [Breast cancer PDX model Gar15-13, Breast cancer PDX model HCI005] |
| SRP446321 |
| Non-canonical functions of UHRF1 maintain DNA methylation homeostasis in cancer cells [Colon] |
| SRP386415 |
| SELF-PATTERNING OF HUMAN STEM CELLS INTO POST-IMPLANTATION LINEAGES [Cell Line] |
| SRP441209 |
| Omics analyses of stromal cells from ACM patients reveal alterations in chromatin organization and mitochondrial homeostasis [Bisulfite-Seq] [Cardiac Mesenchymal Stromal] |
| SRP441171 |
| Single-stranded Premethylated 5mC Adapters Uncovers the Methylation Profile of Plasma Ultrashort Single-Stranded Cell-Free DNA [Plasma] |
| SRP440514 |
| TNRC18 recognizes H3K9me3 to mediate transposable elements silencing at ERV regions [WGBS] [Embryonic Kidney] |
| SRP439675 |
| NPC268 whole-genome bisulfite sequencing (WGBS) [Nasopharyngeal Carcinoma] |
| SRP341621 |
| LABS: linear amplification-based bisulfite sequencing for ultrasensitive cancer detection from cell-free DNA [Plasma Separated From Blood] |
| SRP436137 |
| Malignant Transformation Drives DNA Methylation Loss and Transcriptional Activation of Transposable Element Loci [WGBS] [Neonatal Foreskin] |
| SRP082156 |
| Cancer Associated Fibroblasts are defined by a core set of epigenome changes that contribute to the tumor phenotype [WGBS] [Prostate] |
| SRP080893 |
| Active and senescent human hematopoietic stem and progenitor cell whole genome bisulfite sequencing [DNA] |
| SRP432935 |
| Epigenetic modification sequencing data of human U2OS cells [Tibia] |
| SRP080340 |
| Evidence That Three Classes of Methylomes Specific for Stem, Somatic and Transformed Cells Are Set by Three Independent Mechanisms (Methyl-Seq) [Basophilic Erythroblasts] |
| SRP430982 |
| Whole genome bisulfite sequencing data of blood cfDNA form 29 CRC and 9 Non-CRC patients. [Blood] |
| SRP426633 |
| DNA methylation alterations in prostate cancer patient derived xenograft models revealed by whole genome bisulfite sequencing [Patient Derived Xenograft] |
| SRP426514 |
| Epigenetic therapy activates TE-chimeric transcripts to provide additional source of antigens in glioblastoma stem cells [Brain, Skin] |
| SRP424257 |
| Direct enzymatic sequencing of 5-methylcytosine at single-base resolution [1] [Glioblastoma Tumor] |
| SRP423445 |
| Ultrafast Bisulfite Sequencing for Efficient and Accurate 5-Methylcytosine Detection in DNA and RNA [Plasma, Stem Cell, mESC] |
| SRP420728 |
| 5-hydroxymethylcytosines regulate gene expression as a passive DNA demethylation resisting epigenetic mark in proliferative somatic cells [methylation] [HEK293T] |
| SRP373598 |
| GM12878 MultiOmics [Blood] |
| SRP241842 |
| REH MultiOmics [B Cell Precursor Leukemia] |
| SRP415835 |
| Comprehensive sequence-based DNA methylation analysis suggests that PanIN lesions are acinar-derived and epigenetically primed for carcinogenesis [Pancreas] |
| SRP404930 |
| LN-stem, tumor stem, tumor terminally differentiated CD8 T cells from human kidney cancer [LN, PBMC, Spleen, TDLN, Tumor] |
| SRP076893 |
| “Same Difference”: Comprehensive evaluation of four DNA methylation measurement platforms [Lung Fibroblast] |
| SRP015742 |
| GSE40832: Whole Genome Bisulfite Sequencing by ENCODE/HAIB [ESC, Lymphocyte] |
| SRP015704 |
| Genome-wide mapping of nucleosome positioning and DNA methylation within Individual DNA molecules [Glioblastoma, Lung Fiboblast Cells] |
| SRP409096 |
| Epigenetic dynamics during capacitation of naïve human pluripotent stem cells [PBAT] [chemically reset hPSC, conventional hPSC, embryo-derived naive hPSC] |
| SRP408041 |
| The catalytic activity of TET1 is required for human germ cell fate choice [Bisulfite-Seq] [hESC, hPGCLC] |
| SRP405928 |
| Optimized bisulfite sequencing reveals the lack of 5-methylcytosine in mammalian mitochondrial DNA [WGBS] [Brain, Breast Cancer, ESC, Embryonic Kidney, Hepatocarcinoma, Lung Adenocarcinoma, Melanoma, Neuroblastoma, Platelet] |
| SRP405874 |
| Rebalancing TGFß1/BMP Signals Preserves Effector and Memory Programs in Terminally Dysfunctional CD8+ T Cells [Bisulfite-Seq] [Cord Blood] |
| SRP075910 |
| Global delay in nascent strand DNA methylation [Cell Line, ESC] |
| SRP075876 |
| Cerebral Organoids Recapitulate Epigenomic Signatures of the Human Fetal Brain [Brain, ESC line] |
| SRP357194 |
| HPV integration generates cellular super enhancer and functions as ecDNA to regulate genome-wide transcription [C33A, CaSki, HeLa, S12, SiHa] |
| SRP075562 |
| ZBTB33 (Kaiso) Differentially Regulates Cell Cycle Through cyclin D1 and cyclin E1 in a Cell Specific Manner [BiSulfite-seq] [HeLa] |
| SRP012412 |
| GSE59395: Genome-wide map of regulatory interactions in the human genome [Adrenal Gland, Body Of Pancreas, Bone Marrow, Cell Line, Esophagus Muscularis Mucosa, Esophagus Squamous Epithelium, Fibroblast Of Arm, Gastroesophageal Sphincter, Heart Left Ventricle, Hepatocyte, Lower Leg Skin, Mammary Epithelial, Motor Neuron, Ovary, Prostate Gland, Right Lobe Of Liver, Smooth Muscle, Spleen, Stomach, Suprapubic Skin, Testis, Thyroid Gland, Tibial Nerve, Transverse Colon, Upper Lobe Of Left Lung] |
| SRP014898 |
| Human Sperm Epigenomes and Transcriptomes Reveal Novel Features of Enhancers, Sex Chromosomes, piRNAs, Gametogenesis, and Inherited Small RNAs (Bisulfite-Seq) [Sperm] |
| SRP400466 |
| Multiplex Epigenome Editing of MECP2 to Rescue Rett Syndrome Neurons (WGBS) [ESC] |
| SRP075292 |
| Cumulative Impact of Polychlorinated Biphenyl and Large Chromosomal Duplications on DNA Methylation, Chromatin, and Expression of Autism Candidate Genes. [Brain, Neuroblastoma Cell Line, neuroblastoma cell line with extra copy of part of maternal chr15, neuroblastoma cell line with extra copy of part of maternal chr15 and part of chr22] |
| SRP396513 |
| Rockfish: Detection of 5mC DNA Modifications Using Raw Nanopore Signal [ESC, Purified Cardiomyocyte] |
| SRP398111 |
| to be updated [Blood] |
| SRP336573 |
| Perturbation of TET2 condensation induces genome-wide promiscuous DNA hypomethylation and curtails leukemia cell growth [ESCs (mESCs), Leukemia Cell Line] |
| SRP397737 |
| Global hypermethylation of intestinal epithelial cells is a hallmark feature of neonatal surgical necrotizing enterocolitis [lcm_colon_ileum] [Colon, Ileum] |
| SRP397676 |
| Loss of tight junctions disrupts gastrulation patterning and increases differentiation towards the germ cell lineage in human pluripotent stem cells [Skin Fibroblasts] |
| SRP074852 |
| DNMT and HDAC inhibitors globally induce cryptic TSSs encoded in long terminal repeats [NCI-H1299-EGFP/NEO] |
| SRP396738 |
| Highly efficient and rapid generation of human pluripotent stem cells by chemical reprogramming (WGBS) [Adult Human Adipose Derived Mesenchymal Stromal, Chemically Induced Pluripotent Stem Cell] |
| SRP396408 |
| Neonatal necrotizing enterocolitis-associated DNA methylation signatures in the colon are evident in stool samples of affected individuals [Colon, Stool] |
| SRP396192 |
| DNA Methylation Profile of Lip Tissue from Congenital Non-syndromic Cleft Lip and Palate Patients by Whole Genome Bisulfite Sequencing [Lip] |
| SRP395427 |
| WGBS-seq and oxWGBS-seq Atlas for Oral Squamous Cell Carcinoma [Normal Adjacent, OSCC] |
| SRP012560 |
| GSE34399: Replication Timing by Repli-seq from ENCODE/University of Washington [H1-hESC, Skeletal Muscle Myoblast] |
| SRP074177 |
| Nucleation of DNA Repair Factors by FOXA1 Links DNA Demethylation to Transcriptional Pioneering [MCF-7 cells (siFOXA1-transfected), MCF-7 cells (siNS-transfected)] |
| SRP394454 |
| Methylation profile of latent metastatic (Lat-M) cells from clear cell renal cell carcinoma (ccRCC) [Kidney Cancer] |
| SRP014634 |
| Examination of four human tissue samples by MethylC-seq [Placenta From Full-Term Pregnancy] |
| SRP049651 |
| Large-scale epigenetic reprogramming is punctuated late during the evolution of pancreatic cancer progression [BS-Seq] [Liver Metastasis, Lung Metastasis, Normal Pancreas, Patient A38, Peritoneal Metastasis, Primary Tumor] |
| SRP392105 |
| Placental ischemia disrupts DNA methylation patterns of distal regulatory regions in rat [Placenta, Planceta] |
| SRP389118 |
| Comprehensive analyses of partially methylated domains and differentially methylated regions in esophageal cancer reveal both cell-type- and cancer-specific epigenetic regulation [WGBS] [Esophageal Adenocarcinoma, Esophageal Squamous Cell Carcinoma] |
| SRP387971 |
| Tonic-signaling chimeric antigen receptors drive human regulatory T cell exhaustion [CD4+ TCONV, CD4+ TREG] |
| SRP072141 |
| stem cell epigenomics [H1 stem cell] |
| SRP072078 |
| epigenomic analysis of lung and liver [Liver, Lung] |
| SRP072075 |
| Epigenomic analysis of lymphocytes and fibroblasts [Foreskin Fibroblasts, sorted CD4+ T cells] |
| SRP072071 |
| study of brain methylation [Brain Pre-Frontal Cortex] |
| SRP071891 |
| Functional Haploid Human Oocytes Generated from Polar Body Genomes (Bisulfite-Seq) [ESC, Polar Body Nuclear Transfer] |
| SRP387319 |
| Dysfunction of 5-methylcytosine oxidases and the Polycomb protein RYBP leads to widespread DNA hypermethylation and cell transformation [WGBS] [Bronchial] |
| SRP387154 |
| Accurate simultaneous sequencing of genetic and epigenetic bases in DNA [Blood] |
| SRP071771 |
| Identification of methylation haplotype blocks aids in deconvolution of heterogeneous tissue samples and tissue-of-origin mapping from plasma DNA [WGBS] [Liver, Skeletal Muscle] |
| SRP304105 |
| Large-scale manipulation of promoter DNA methylation reveals context-specific transcriptional responses and stability [Cell Line] |
| SRP384348 |
| Evidence that direct inhibition of transcription factor binding is the prevailing mode of gene and repeat repression by DNA methylation [WGBS-Seq] [Ebryonic Stem Cell, Embryonic Kidney, Ngn2 neurons] |
| SRP013816 |
| SINE transcription by RNA polymerase III is suppressed by histone methylation but not DNA methylation [HeLa cervical carcinoma] |
| SRP377560 |
| Reversible epigenetic alterations mediate PSMA expression heterogeneity in advanced metastatic prostate cancer. [Prostate Cancer Patient Derived Xenograft] |
| SRP376918 |
| Droplet-based bisulfite sequencing for high-throughput profiling of single-cell DNA methylomes [N.A.] |
| SRP068579 |
| Reversion to naïve human pluripotency creates a new methylation landscape devoid of blastocyst or germline memory [EpiLC, hESC] |
| SRP330251 |
| Vitamin B12 regulates the transcriptomes of human ileal epithelial cells (iECs) [Ileum] |
| SRP375137 |
| DNMT3A-mediated DNA demethylation is required for hypoxia induced EMT of human cancer cells |
| SRP373924 |
| NOMe-Seq analysis of IMR-90 cell line II [IMR-90] |
| SRP373708 |
| WGBS of primary and recurrent ovarian cancer tumors with and without BRCA1/2 mutations [Ovarian Cancer Tumors] |
| SRP067779 |
| Novel contribution of acetylated histone variant H2A.Z in activation of neo-enhancers in prostate cancer [NOMe-seq] [LNCaP clone FGC (ATCC CRL-1740). Androgen-sensitive human prostate adenocarcinoma, Primary prostate epithelial cells. Cambrex Bio Science Cat. No. CC-2555] |
| SRP323101 |
| RRBS-based quantitative methylation analysis define 100% methylation fidelity CpG sites [Peripheral Blood, Retina] |
| SRP368308 |
| Lack of major genome-wide DNA methylation changes in succinate-treated human epithelial cells [Bronchial] |
| SRP367891 |
| DNA methylation analysis of malignant and normal uveal melanocytes reveals novel molecular features of uveal melanoma [Primary Culture, UM sorted] |
| SRP085035 |
| Molecular Criteria for Defining the Naive Human Pluripotent State [methylation profiling] [Naive human ESCs, Primed human ESCs] |
| SRP364929 |
| human rDNA obesity [Blood] |
| SRP012499 |
| Epigenetic alterations of a DNMT3B-mutant ICF patient at base-pair resolution [Blood] |
| SRP362494 |
| The aberrant epigenome of DNMT3B-mutated ICF1 patient iPSCs is amenable to correction, with the exception of a subset of regions with H3K4me3- and/or CTCF-based epigenetic memory (WGBS) [iPSCs] |
| SRP000996 |
| BI Human Reference Epigenome Mapping Project [CD184+ endoderm cultured, CD19, CD34 Primary Cells, Cell Line, Fetal Adrenal, Fetal Heart, Fetal Muscle Leg, Fetal Muscle Trunk, Fetal Placenta, Fetal Spinal Cord, Fetal Stomach, Fetal Thymus, IMR90, adult CD14, adult CD3, adult CD56] |
| SRP358957 |
| WGBS of OLD and YOUNG primary Fibroblasts [Arm Skin, Inguinal Area, NS, Umbilical Area] |
| SRP353536 |
| Transcriptome and Bisulfite sequencing of drug treated breast cancer cell lines [Mammary Gland] |
| SRP012161 |
| Evolutionary Significance of DNA Methylation in Human and Chimpanzee Brains [Prefrontal Cortex] |
| SRP357372 |
| WGBS and RNA-seq of HUVECs transfected with siNC or siTET2 [Umbilical Vein Endothelial Cells] |
| SRP357363 |
| Whole-genome bisulfite sequencing anaysis of PSCs [Feeder-free PSC] |
| SRP356708 |
| Young vs Old Fibroblast WGBS [Skin] |
| SRP299802 |
| Acute lymphoblastic leukemia displays a distinct highly methylated genome [Cell Line] |
| SRP353982 |
| methyl-Seq of Pediatric ARDS Nasal and Bronchial Brushings [Bronchial, Nasal] |
| SRP353670 |
| DNA Methylation Potential Energy Landscape Analysis of MLL-rearranged Acute Myeloid Leukemia (AML) and Normal hematopoietic precursors [WGBS] [Primary] |
| SRP353340 |
| NOMe-Seq analysis of IMR-90 cell line [IMR-90] |
| SRP353040 |
| WGBS of control and DAC-treated tumor tissue from PDX model [Colorectal Cancer] |
| SRP352189 |
| CRISPR-based targeted haplotype-resolved assembly of a megabase region [WGBS] [B Cell] |
| SRP348645 |
| Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [WGBS] [Immortalized Astrocyte Cells] |
| SRP346999 |
| Whole genome bilsufite sequencing of sgTET2 HepG2 [Missing] |
| SRP346828 |
| NOMe-HiC: joint profiling of genetic variants, DNA methylation, chromatin accessibility, and 3D genome in the same DNA molecule [Lung Fibroblast Cell Line] |
| SRP011945 |
| Base Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome [ES Cells, ESC] |
| SRP011746 |
| Ultra-low-input, tagmentation-based whole genome bisulfite sequencing |
| SRP345048 |
| Antigen cross-presentation in young tumor-bearing hosts promotes CD8 T cell terminal differentiation [WGBS] [Germ Cell Tumor] |
| SRP342964 |
| scSPLAT, a scalable plate-based protocol for single cell WGBS library preparation [Blood] |
| SRP339574 |
| Methylation Mediated Silencing of Protein Kinase C Zeta Induces Apoptosis Avoidance through ATM/Chk-2 Inactivation in Dedifferentiated Chondrosarcoma [Chondrosarcoma Cell Line] |
| SRP338853 |
| DNA methylation of MOLM-13 cells [Cell Line] |
| SRP338189 |
| Deleting DNMT3A in CAR T cells prevents exhaustion and 1 enhances antitumor activity [T Cells] |
| SRP337501 |
| DNA methylation landscape and signature of CD4+ lymphocytes of lamina propria in Crohn's patients by reduced representation and bisulfite sequencing [BiSulfite-seq] [Isolated CD4+] |
| SRP337159 |
| Homo sapiens Epigenomics [Sperm] |
| SRP337018 |
| whole-genome wide DNA methylation aberration in HCC [Liver] |
| SRP334550 |
| Proinflammatory cytokines promote TET2-mediated DNA demethylation during CD8 T cell effector differentiation [CD8+ T Cells] |
| SRP199025 |
| Molecular mechanism of KCNJ5 gene hotspot mutation in adrenal aldosteronoma [Adrenal Gland] |
| SRP332448 |
| H3K9 dimethylation safeguards cancer cells against activation of the Interferon pathway [WGBS] [U937] |
| SRP332277 |
| Methyl-seq Human [Sperm] |
| SRP332046 |
| The WGBS and ATAC-seq from human serum and amniotic cell [Blood] |
| SRP329794 |
| Anchor-Based Bisulfite Sequencing determines genome-wide DNA methylation [Cell Line] |
| SRP328700 |
| Whole genome methylation profiliing between the IMU and KRT subtypes of HPV-associated head and neck cell carcinoma (HNSCC) [Head And Neck Cell Carcinoma] |
| SRP268979 |
| Loss of epigenetic suppression of retrotransposons with oncogenic potential in aging mammary luminal epithelial cells [Mammary Luminal Epithelial] |
| SRP286872 |
| Transient naive reprogramming corrects hiPS cells functionally and epigenetically [WGBS] [ESC, Keratinocytes, Mesenchymal Stem Cell, Secondary Fibroblasts, iPSC] |
| SRP291325 |
| Transient naive reprogramming corrects hiPS cells functionally and epigenetically [WGBS 2] [Cultured Human Fibroblasts, ESC, Pluripotent Stem Cell, Reprogramming Intermediate, iPSC] |
| SRP325924 |
| Distinct DNA methylation landscape between pediatric brain and adult brain [Cerebellum, Cerebrum] |
| SRP325722 |
| Chemical-based external stimulation reprograms human somatic cells into pluripotency (WGBS) [Adult Human Adipose Derived Mesenchymal Stromal, Chemically Induced Pluripotent Stem Cell, Embryonic Fibroblasts, hES cells H1, hES cells H9, somatic cells during chemical reprogramming stage I, somatic cells during chemical reprogramming stage II, somatic cells during chemical reprogramming stage II without 5azac, somatic cells during chemical reprogramming stage II without JNKIN8] |
| SRP325428 |
| Systematic profiling of DNMT3A variants reveals protein instability mediated by the DCAF8 E3 ubiquitin ligase adaptor [Cell Line, ESC] |
| SRP321876 |
| Genetic variation at mouse and human ribosomal DNA influences associated epigenetic states [Blood, Kidney] |
| SRP325062 |
| Cerebrospinal fluid cell-free DNA methylomes recapture pediatric medulloblastoma tissue's tumor feature [CSF, Tumor] |
| SRP324100 |
| Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism [WGBS] [Placenta] |
| SRP324016 |
| Cerebrospinal fluid cell-free DNA methylomes subtyping pediatric medulloblastoma [Cerebrospnial Fluid From Pediatric Medullablastoma Patient] |
| SRP323990 |
| Identification of DNA Methylation Predicts Onset of PTSD and Depression Following Trauma [Peripheral Blood Mononuclear Cells] |
| SRP323032 |
| Mapping the glucocorticoid gene regulatory network and alterations that contribute to steroid resistance in childhood acute lymphoblastic leukemia [WGBS] [ALL] |
| SRP321573 |
| Conservation and divergence of DNA methylation patterns and functions in vertebrates [Primary Dermal Fibroblasts, Psoas Muscle] |
| SRP320538 |
| Dynamic patterns of DNA methylation in the normal prostate epithelial differentiation program are targets of aberrant methylation in prostate cancer [BiSulfite-seq] [Cell Line] |
| SRP319892 |
| Expanding highly homogenous population of human primordial germ cell like cells in long-term and feeder-free culture condition [WGBS] [EGC, freshly isolated human PGCLC, iPSC, long-term culture human PGCLC c56, long-term culture human PGCLC c63, long-term culture human PGCLC c71, long-term culture human PGCLC c84] |
| SRP318399 |
| DNA methylation profiles of four immune cell types from MS patients and healthy controls [Peripheral Blood] |
| SRP316873 |
| Whole-Genome Bisulfite Sequencing of Nasopharyngeal Carcinoma and Nasopharyngeal Epithelial Tissues [SeqCapEpi] [Cell Line, Methylation Control] |
| SRP059772 |
| Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver [oxBS-Seq and BS-Seq] [Liver, Lung] |
| SRP316059 |
| NSCLP-Twins [Saliva DNA] |
| SRP315878 |
| Homo sapiens Epigenomics [Bone Marrow, Peripheral Blood] |
| SRP315039 |
| DNA methylome and genome sequencing of human ovarian epithelial cell line [Ovarian Epithelium] |
| SRP314963 |
| The proline and serine rich protein PROSER1 mediates O-GlcNAcylation of TET2 to regulate DNA demethylation on UTX-dependent enhancers and CpG islands [WGBS] [Embryonic Kidney] |
| SRP059433 |
| Gender Differences in Global but not Targeted Demethylation in iPSC Reprogramming [BS seq AIDKO MEF1, BS seq ESC 1, BS seq ESC 2, BS seq ESC 3, BS seq MALE MEF 1, BS seq MALE MEF 2, BS seq MALE MEF 3, BS seq MEF 1, BS seq MEF 2, BS seq MEF 3, BS seq d6 Thy1 positive 1, BS seq d6 Thy1 positive 2, BS seq d6 Thy1 positive 3, Fibroblast, Reprogramming Fibroblast, iPSC] |
| SRP059313 |
| UPF : Methylation_primates [Blood] |
| SRP059289 |
| Conversion of Human Gastric Epithelial Cells to Multipotent Endodermal Progenitors using Defined Small Molecules [DNA methylation] [Stomach, hepatoctes induced by differentiation of hiMEPs, hiMEPs derived from GECs by reprogramming] |
| SRP310254 |
| DNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells [BiSulfite-seq] [hESC-derived macrophages] |
| SRP268755 |
| Probing the signaling requirements for naïve human pluripotency by high-throughput chemical screening [WGBS] [Naive hESC, Primed hESC, hESC] |
| SRP309472 |
| Epigenetic crosstalk [KYSE-30] |
| SRP309354 |
| Stable DNMT3L Overexpression in SH-SY5Y Neurons Recreates a Facet of the Genome-Wide Down Syndrome DNA Methylation Signature [SH-SY5Y] |
| SRP309314 |
| Epigenomics of nasal mucosa in children with acute respiratory illness [Nasal Mucosa] |
| SRP058102 |
| Analysis of DNA Methylation in replication and cell cycle arrest. [Primary Dermal Fibroblasts] |
| SRP050499 |
| The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells [Brain, Gonadal Somatic Cells, Heart, Primordial Germ] |
| SRP308854 |
| Age-associated cryptic transcription in mammalian stem cells is linked to permissive chromatin at cryptic promoters [WGBS] [umbilical cord-derived mesenchymal stem cells (PCS-500-010 lot #63216949), umbilical cord-derived mesenchymal stem cells (PCS-500-010 lot #63216950)] |
| SRP308810 |
| Genome-wide Programmable Transcriptional Memory by CRISPR-based Epigenome Editing [HEK293T] |
| SRP308490 |
| Pan-cancer predictions of transcription factors mediating aberrant DNA methylation [HCC1954, hTERT-HME1] |
| SRP304712 |
| Epigenome profiling in gastric carcinogenesis by whole genome bisulfite sequencing [Stomach] |
| SRP304684 |
| Inherent genomic properties underlie the epigenomic heterogeneity of human induced pluripotent stem cells [WGBS] |
| SRP057450 |
| A novel bivalent chromatin state exists at enhancers [HCT116] |
| SRP008337 |
| Role of DNMT3B in the regulation of early neural and neural crest specifiers [H9] |
| SRP008144 |
| Directional DNA methylation changes and complex intermediate states accompany lineage specificity in the adult hematopoietic compartment [HSPC, Lymphocyte, Neutrohphil, Umbilical Cord Blood] |
| SRP007820 |
| The DNA methylomes of a newborn and a centenarian [Peripheral Blood, Umbilical Cord Blood] |
| SRP007400 |
| Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates [Sperm] |
| SRP006774 |
| Increased methylation variation in epigenetic domains across cancer types |
| SRP006728 |
| Genome-wide DNA methylation mapping in breast cancer cells (HCC1954) and normal breast cells (HMEC) [Breast Cancer] |
| SRP003529 |
| Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells |
| SRP001720 |
| Dynamic Changes in the Human Methylome During Differentiation [ESC, Fibroblasts derived from human ESCs, Newborn Human Foreskin Fibroblasts] |
| SRP000941 |
| UCSD Human Reference Epigenome Mapping Project [Adipose, Adipose Tissue, Adrenal Gland, Aorta, Bladder, Cell Line, ESC, Esophagus, Gastric, IMR90, Left Ventricle, Liver, Lung, Ovary, Pancreas, Psoas Muscle, Right Atrium, Right Ventricle, Sigmoid Colon, Small Intestine, Spleen, Thymus] |
| ERP139499 |
| Whole genome bisulfite sequencing of liver samples of five mammals (human, rhesus macaque, mouse, rat and dog) [Liver] |
| ERP135424 |
| Single-cell methylation profiling of a twin pair discordant for common variable immunodeficiency [Memory B-Cell] |
| ERP135121 |
| Whole Genome Bisulfite Sequencing (WGBS) of the SH-SY5Y human neuroblastoma cell line [Bone Marrow] |
| ERP009555 |
| Effects of HIST1H2ac knockdown on the DNA methylation landscape of breast cancer cell line MCF-7 [MCF-7] |
| ERP130693 |
| Performance comparison and in-silico harmonisation of commercial platforms for DNA methylome analysis by targeted bisulfite sequencing |
| ERP129475 |
| DNA Methylation signature in mononuclear cells and proinflammatory cytokines in Meniere Disease [Blood] |
| ERP109780 |
| Whole-genome fingerprint of the DNA methylome during chemically induced differentiation of the AML cell line HL-60/S4 [HL60/S4] |
| ERP127251 |
| Single Cell Multi-Omics of Human Preimplantation Embryos Demonstrates Susceptibility to Excess Glucocorticoid Exposure(BSseq part) [Whole Organism] |
| ERP123063 |
| Whole genome DNA methylation analysis of human embryonic stem cells |
| ERP122802 |
| Whole genome DNA methylation analysis of human testicular germ cells |
| ERP122363 |
| No evidence for intervention-associated DNA methylation changes in monocytes of patients with posttraumatic stress disorder or anorexia nervosa |
| ERP005229 |
| Whole-genome Bisulfite Sequencing for Methylation Analysis of human monocytes |
| ERP117337 |
| Whole genome DNA methylation analysis of sperm DNA from normozoospermic and oligoasthenoteratozoospermic men |
| ERP004221 |
| Genome-wide methylome profiling of normal breast and breast tumors [Breast Cancer] |
| ERP114912 |
| Genome-wide Analysis of the Nucleosome Landscape in Individuals with Coffin-Siris Syndrome |
| ERP110315 |
| Single molecule sequencing and assembly of flow sorted Y chromosome from HG02982 [Lymphoblastoid Cell Line] |
| ERP110208 |
| Whole genome methylation analysis of sperm and blood from young and old men. [Blood, Sperm] |
| ERP106410 |
| An integrated genomic analysis of L1 retrotransposon mosaicism in the brain [Hippocampus] |
| ERP109664 |
| Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps, dataset 2 [Colon] |
| ERP109610 |
| Bisulphite-seq to investigate the proto CpG island methylator phenotype of sessile serrated adenoma/polyps [Colon] |
| ERP107813 |
| Bisulfite-seq of synovial biopsies from rheumatoid arthritis patients [Synovial Membrane] |
| ERP010942 |
| We present the first genome-scale analysis of the effect of CpG methylation on DNA-binding of TFs. [Embryo, GP5D, LHSAR cell with HOXB13 transduced, Lhsar, LoVo, VCap] |
| ERP018009 |
| Base resolution maps of mutations, 5-methylcytosine and 5-hydroxymethylcytosine, and transcriptome of blood, tumour and margin samples from a glioblastoma multiforme patient [Brain] |
| ERP014223 |
| DNA methylation profiling of human naive embryonic stem cells [Embryo] |
| ERP011276 |
| 5Aza and TSA treatment of MCF7 cells (BS-seq) [MCF-7] |
| ERP008742 |
| Germ_cell_methylation_dynamics [308-D5 TE Embryo 1, 308-D5 TE Embryo 2, 693-D6 TE Embryo 2, A3 mPGCLC1, BS treated DNA PBAT library, C3 mPGCLC2, D2 mPGCLC1, D3 mPGCLC2, E3 mPGCLC2, F1 hPGCLC1, F2 mPGCLC1, F3 mPGCLC2, G2 mPGCLC1, G3 mPGCLC2, H3 mPGCLC2, P11(4), P14(2), P8(3), PBAT libraries of human ESCs H9, PBAT libraries of mouse ESCs E14 G7, PRGp8 4, Passage 10 Sort 2, Passage 10 Sort 3, Passage 10 Sort 4, S6EOSKSR 1, S6EOSKSR 3, S6EOSp15 1, S6EOSp15 2, S6EOSp5 3, S6EOSp9 1, S6EOSp9 2, S6EOSp9 3, hES1, hES2, hES3, hEpiLC 2016214 2, hEpiLC 201635, hKSR2, hKSR3, mEpiLC E14 d1 1, mEpiLC E14 d2 2] |
| ERP144942 |
| Validation of differentially methylated DNA regions in colorectal precancerous lesions. [Colon] |
| DRP012061 |
| Epigenetic regulation by nitrosative stress as a potential mechanism of long COVID [Small Airway Epithelial] |
| DRP008243 |
| Transcriptome and methylome analyses of trophoblast stem-like cells derived from primed human embryonic stem cells [TSLprimed] |
| DRP007001 |
| Development of long-read whole genome methylation sequencing method using the enzymatic base conversion and the nanopore sequencing [BT-474, MDA-MB-231] |
| DRP007963 |
| Whole genome bisulfite sequencing of colorectal cancer [Metastatic Cancerous Tissue Obtained From Distant Lymph Node Metastasis, Metastatic Cancerous Tissue Obtained From Hepatic Metastasis, Metastatic Cancerous Tissue Obtained From Lung Metastasis, Primary Cancerous] |
| DRP006124 |
| DNA methylome analyses and expression analysis for malignant glioma harbouring H3F3A gene mutation [Glioma] |
| DRP004736 |
| Generation of human oogonia from induced pluripotent stem cells in vitro [Pgclc, aggregate cultured PGCLC, iMeLC, iPSC] |
| DRP003407 |
| Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing [EpiLC, IMR-90, Spermatogonia] |
| DRP001914 |
| Omics catalogue of lung adenocarcinoma cell lines [Cell Line] |
| Common |
| Common methbase tracks for the hg38 assembly |
|
|
|
|
|---|
| CH17 |
| CH17 (mole) |
| CH251 (chimp) |
| CH251 (chimp) |
| CH276 (orangutan) |
| CH276 (orangutan) |
| CH277 (gorilla) |
| CH277 (gorilla) |
| CH250 (macaque) |
| CH250 (macaque) |
| CH259 (marmoset) |
| CH259 (marmoset) |
| ABC9 |
| ABC9 |
| ABC10 |
| ABC10 |
| ABC11 |
| ABC11 |
| ABC12 |
| ABC12 |
| ABC13 |
| ABC13 |
| ABC14 |
| ABC14 |
| CH1277(gorilla_FES) |
| CH1277(gorilla_FES) |
| CH276P95 (orangutan) |
| CH276 95% identity (orangutan) |
| CH277P95 (gorilla) |
| CH277 95% identity (gorilla) |
|
|
|
|
|---|
| Assembly |
| Assembly from Fragments |
| Assembly Tracks |
| Assembly identifiers, clones, and markers |
FISH Clones |
| Clones Placed on Cytogenetic Map Using FISH |
| GRC Contigs |
| Genome Reference Consortium Contigs |
| Scaffolds |
| GRCh38 Defined Scaffold Identifiers |
| STS Markers |
| STS Markers on Genetic (blue) and Radiation Hybrid (black) Maps |
| Centromeres |
| Centromere Locations |
| Chromosome Band |
| Chromosome Bands Localized by FISH Mapping Clones |
| Clone Ends |
| Mapping of clone libraries end placements |
| Exome Probesets |
| Exome Capture Probesets and Targeted Region |
| Gap |
| Gap Locations |
| GC Percent |
| GC Percent in 5-Base Windows |
| GRC Incident |
| GRC Incident Database |
| p14
GRC Patches |
| GRC Patches: Alt Haplotypes and Fix Sequences |
| Hg19 Diff |
| Contigs New to GRCh38/(hg38), Not Carried Forward from GRCh37/(hg19) |
| INSDC |
| Accession at INSDC - International Nucleotide Sequence Database Collaboration |
| LiftOver & ReMap |
| UCSC LiftOver and NCBI ReMap: Genome alignments to convert annotations to hg19 |
| LRG Regions |
| Locus Reference Genomic (LRG) / RefSeqGene Sequences Mapped to Dec. 2013 (GRCh38/hg38) Assembly |
| Mappability |
| Hoffman Lab Umap and Bismap Mappability |
| Bismap |
| Single-read and multi-read mappability after bisulfite conversion |
| Umap |
| Single-read and multi-read mappability by Umap |
| Problematic Regions |
| Problematic/special genomic regions for sequencing or very variable regions |
| Problematic Regions |
| Problematic/special genomic regions for sequencing or very variable regions |
| Highly Reproducible Regions |
| Highly Reproducible genomic regions for sequencing |
| GIAB Problematic Regions |
| Difficult regions from GIAB via NCBI |
| Recomb Rate |
| Recombination rate: Genetic maps from deCODE and 1000 Genomes |
| Recomb. deCODE Avg |
| Recombination rate: deCODE Genetics, average from paternal and maternal (mat for chrX) |
| Recomb. deCODE Pat |
| Recombination rate: deCODE Genetics, paternal |
| Recomb. deCODE Mat |
| Recombination rate: deCODE Genetics, maternal |
| Recomb. deCODE Evts |
| Recombination events in deCODE Genetic Map (zoom to < 10kbp to see the events) |
| Recomb. deCODE Dmn |
| Recombination rate: De-novo mutations found in deCODE samples |
| Recomb. 1k Genomes |
| Recombination rate: 1000 Genomes, lifted from hg19 (PR Loh) |
| RefSeq Acc |
| RefSeq Accession |
| Restr Enzymes |
| Restriction Enzymes from REBASE |
| Short Match |
| Perfect Matches to Short Sequence () |
|
|
|
|
|---|
| Cases 29085 Samples Rare UniqueCalls |
| Cases 29085 Samples Rare UniqueCalls |
| Cases_29085Samples_remap |
| Cases_29085Samples_remap |
| Coe2014_controls |
| Coe2014_controls |
| Controls 19584 Samples AllCalls |
| Controls 19584 Samples AllCalls |
| Controls_19584Samples_remap |
| Controls_19584Samples_remap |
| gnomad_SV_hg38 |
| gnomad_SV_hg38 |
| CNV_MOPS |
| CNV_MOPS |
| CNV_MOPS_MANTA |
| CNV_MOPS_MANTA |
| DELLY |
| DELLY |
| DELLY_CNV_MOPS |
| DELLY_CNV_MOPS |
| DELLY_CNV_MOPS_MANTA |
| DELLY_CNV_MOPS_MANTA |
| DELLY_MANTA |
| DELLY_MANTA |
| MANTA |
| MANTA |
| Hakonarson_NatCom2020 |
| Hakonarson_NatCom2020 |
| SSC_cases_6way |
| SSC_cases_6way |
| Coe_2014_regions |
| Coe 2014 significant regions |
|
|
|
|
|---|
| updated
GENCODE V48 |
| GENCODE V48 |
| NCBI RefSeq |
| RefSeq genes from NCBI |
| CCDS |
| Consensus CDS |
| CRISPR Targets |
| CRISPR/Cas9 -NGG Targets, whole genome |
| GENCODE Archive |
| GENCODE Archive |
| GENCODE V47 |
| GENCODE V47 |
| GENCODE V46 |
| GENCODE V46 |
| GENCODE V45 |
| GENCODE V45 |
| GENCODE V44 |
| GENCODE V44 |
| GENCODE V43 |
| GENCODE V43 |
| GENCODE V39 |
| GENCODE V39 |
| GENCODE V38 |
| GENCODE V38 |
| GENCODE V36 |
| GENCODE V36 |
| GENCODE Versions |
| Container of all new and previous GENCODE releases |
| All GENCODE V47 |
| All GENCODE annotations from V47 (Ensembl 113) |
| All GENCODE V46 |
| All GENCODE annotations from V46 (Ensembl 112) |
| All GENCODE V45 |
| All GENCODE annotations from V45 (Ensembl 111) |
| All GENCODE V44 |
| All GENCODE annotations from V44 (Ensembl 110) |
| All GENCODE V43 |
| All GENCODE annotations from V43 (Ensembl 109) |
| All GENCODE V42 |
| All GENCODE annotations from V42 (Ensembl 108) |
| All GENCODE V41 |
| All GENCODE annotations from V41 (Ensembl 107) |
| All GENCODE V40 |
| All GENCODE annotations from V40 (Ensembl 106) |
| All GENCODE V39 |
| All GENCODE annotations from V39 (Ensembl 105) |
| All GENCODE V38 |
| All GENCODE annotations from V38 (Ensembl 104) |
| All GENCODE V37 |
| All GENCODE annotations from V37 (Ensembl 103) |
| All GENCODE V36 |
| All GENCODE annotations from V36 (Ensembl 102) |
| All GENCODE V35 |
| All GENCODE annotations from V35 (Ensembl 101) |
| All GENCODE V34 |
| All GENCODE annotations from V34 (Ensembl 100) |
| All GENCODE V33 |
| All GENCODE annotations from V33 (Ensembl 99) |
| All GENCODE V32 |
| All GENCODE annotations from V32 (Ensembl 98) |
| All GENCODE V31 |
| All GENCODE annotations from V31 (Ensembl 97) |
| All GENCODE V30 |
| All GENCODE annotations from V30 (Ensembl 96) |
| All GENCODE V29 |
| All GENCODE annotations from V29 (Ensembl 94) |
| All GENCODE V28 |
| All GENCODE annotations from V28 (Ensembl 92) |
| All GENCODE V27 |
| All GENCODE annotations from V27 (Ensembl 90) |
| All GENCODE V26 |
| All GENCODE annotations from V26 (Ensembl 88) |
| All GENCODE V25 |
| All GENCODE transcripts including comprehensive set V25 |
| All GENCODE V24 |
| All GENCODE transcripts including comprehensive set V24 |
| All GENCODE V23 |
| All GENCODE transcripts including comprehensive set V23 |
| All GENCODE V22 |
| All GENCODE transcripts including comprehensive set V22 |
| GENCODE V20 (Ensembl 76) |
| Gene Annotations from GENCODE Version 20 (Ensembl 76) |
| updated
HGNC |
| HUGO Gene Nomenclature |
IKMC Genes Mapped |
| International Knockout Mouse Consortium Genes Mapped to Human Genome |
| LRG Transcripts |
| Locus Reference Genomic (LRG) / RefSeqGene Fixed Transcript Annotations |
| MANE |
| MANE Select Plus Clinical: Representative transcript from RefSeq & GENCODE |
| MGC/ORFeome Genes |
| MGC/ORFeome Full ORF mRNA Clones |
| MGC Genes |
| Mammalian Gene Collection Full ORF mRNAs |
| ORFeome Clones |
| ORFeome Collaboration Gene Clones |
| Non-coding RNA |
| RNA sequences that do not code for a protein |
|
lincRNA RNA-Seq |
| lincRNA RNA-Seq reads expression abundances |
|
lincRNA TUCP |
| lincRNA and TUCP transcripts |
| sno/miRNA |
| C/D and H/ACA Box snoRNAs, scaRNAs, and microRNAs from snoRNABase and miRBase |
| tRNA Genes |
| Transfer RNA Genes Identified with tRNAscan-SE |
| Other RefSeq |
| Non-Human RefSeq Genes |
| Pfam in GENCODE |
| Pfam Domains in GENCODE Genes |
| Prediction Archive |
| Gene Prediction Archive |
| AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
| Geneid Genes |
| Geneid Gene Predictions |
| Genscan Genes |
| Genscan Gene Predictions |
| SGP Genes |
| SGP Gene Predictions Using Mouse/Human Homology |
| SIB Genes |
| Swiss Institute of Bioinformatics Gene Predictions from mRNA and ESTs |
| new
Pseudogenes |
| Pseudogenes and Parents |
| RetroGenes V9 |
| Retroposed Genes V9, Including Pseudogenes |
| TransMap V5 |
| TransMap Alignments Version 5 |
| TransMap Ensembl |
| TransMap Ensembl and GENCODE Mappings Version 5 |
| TransMap RefGene |
| TransMap RefSeq Gene Mappings Version 5 |
| TransMap RNA |
| TransMap GenBank RNA Mappings Version 5 |
| TransMap ESTs |
| TransMap EST Mappings Version 5 |
| UCSC Alt Events |
| Alternative Splicing, Alternative Promoter and Similar Events in UCSC Genes |
| UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
|
|
|
|
|---|
| AlphaMissense |
| AlphaMissense Score for all possible single-basepair mutations (zoom in for scores) |
| CADD 1.6 |
| CADD 1.6 Score for all single-basepair mutations and selected insertions/deletions |
| CADD 1.6 |
| CADD 1.6 Score for all possible single-basepair mutations (zoom in for scores) |
| CADD 1.6 Del |
| CADD 1.6 Score: Deletions - label is length of deletion |
| CADD 1.6 Ins |
| CADD 1.6 Score: Insertions - label is length of insertion |
| CADD 1.7 |
| CADD 1.7 Score for all single-basepair mutations and selected insertions/deletions |
| CADD 1.7 |
| CADD 1.7 Score for all possible single-basepair mutations (zoom in for scores) |
| CADD 1.7 Del |
| CADD 1.7 Score: Deletions - label is length of deletion |
| CADD 1.7 Ins |
| CADD 1.7 Score: Insertions - label is length of insertion |
| Cancer Gene Expr |
| Gene Expression in 33 TCGA Cancer Tissues (GENCODE v23) |
| Cancer Gene Expr |
| Gene Expression in 33 TCGA Cancer Tissues (GENCODE v23) |
| Cancer Transc Expr |
| Transcript-level Expression in 33 TCGA Cancer Tissues (GENCODE v23) |
| new
CIViC |
| CIViC - Expert & crowd-sourced cancer variant interpretation |
| ClinGen |
| ClinGen curation activities (Dosage Sensitivity and Gene-Disease Validity) |
ClinGen CNVs |
| Clinical Genome Resource (ClinGen) CNVs |
| ClinVar Variants |
| ClinVar Variants |
| Constraint scores |
| Human constraint scores |
| JARVIS |
| JARVIS: score to prioritize non-coding regions for disease relevance |
| HMC |
| HMC - Homologous Missense Constraint Score on PFAM domains |
| UKB Depl. Rank Score |
| UK Biobank / deCODE Genetics Depletion Rank Score |
|
Coriell CNVs |
| Coriell Cell Line Copy Number Variants |
| updated
COSMIC |
| Catalogue of Somatic Mutations in Cancer V101 |
|
COSMIC Regions |
| Catalogue of Somatic Mutations in Cancer V82 |
| COVID Data |
| Container of SARS-CoV-2 data |
| COVID GWAS v4 |
| COVID risk variants from GWAS meta-analyses by the COVID-19 Host Genetics Initiative (Rel 4, Oct 2020) |
| COVID GWAS v3 |
| GWAS meta-analyses from the COVID-19 Host Genetics Initiative |
| COVID Rare Harmful Var |
| Rare variants underlying COVID-19 severity and susceptibility from the COVID Human Genetics Effort |
| DECIPHER |
| DECIPHER |
| DECIPHER CNVs |
| DECIPHER CNVs |
| DECIPHER Population CNVs |
| DECIPHER: Population CNVs |
| Development Delay |
| Copy Number Variation Morbidity Map of Developmental Delay |
| Dosage Sensitivity |
| pHaplo and pTriplo dosage sensitivity map from Collins et al 2022 |
| GenCC |
| GenCC: The Gene Curation Coalition Annotations |
| Gene Interactions |
| Protein Interactions from Curated Databases and Text-Mining |
| GeneReviews |
| GeneReviews |
| GWAS Catalog |
| NHGRI-EBI Catalog of Published Genome-Wide Association Studies |
| HGMD public |
| Human Gene Mutation Database - Public Version Dec 2024 |
| LOVD Variants |
| LOVD: Leiden Open Variation Database Public Variants |
| new
MITOMAP |
| MITOMAP: A human mitochondrial genome database |
| Orphanet |
| Orphadata: Aggregated Data From Orphanet |
| PanelApp |
| Genomics England PanelApp Diagnostics |
|
REVEL Scores |
| REVEL Pathogenicity Score for single-base coding mutations (zoom for exact score) |
| SNPedia |
| SNPedia |
| new
Splicing Impact |
| Splicing Impact Prediction Scores and Databases |
| AbSplice Scores |
| Aberrant Splicing Prediction Scores |
| SpliceAI |
| SpliceAI: Splice Variant Prediction Score |
| new
SpliceVarDB |
| SpliceVarDB: Experimentally validated splicing variants |
| TCGA Pan-Cancer |
| TCGA Pan-Cancer mutations: 33 TCGA Cancer Projects Summary (Pan-Can 33) |
| UniProt Variants |
| UniProt/SwissProt Amino Acid Substitutions |
| updated
Variants in Papers |
| Genetic Variants mentioned in scientific publications |
| Avada Variants |
| Avada Variants extracted from full text publications |
| new
enGenome VarChat |
| enGenome VarChat: Literature match and variant's summary |
| Mastermind Variants |
| Genomenon Mastermind Variants extracted from full text publications |
| new
Varaico Variants |
| Varaico Variants extracted from full text publications, titles, and abstracts |
|
|
|
|
|---|
| dbSNP 155 |
| Short Genetic Variants from dbSNP release 155 |
| 1000 Genomes |
| 1000 Genomes Phase 3 |
| 1000 Genomes Trios |
| Thousand Genomes Project Family VCF Trios |
| 1000G Ph3 Vars |
| 1000 Genomes Phase 3 Integrated Variant Calls from IGSR: SNVs and Indels |
| Array Probesets |
| Microarray Probesets |
| dbSNP Archive |
| dbSNP Track Archive |
| dbSNP 153 |
| Short Genetic Variants from dbSNP release 153 |
| Common SNPs(151) |
| Simple Nucleotide Polymorphisms (dbSNP 151) Found in >= 1% of Samples |
| All SNPs(151) |
| Simple Nucleotide Polymorphisms (dbSNP 151) |
| Flagged SNPs(151) |
| Simple Nucleotide Polymorphisms (dbSNP 151) Flagged by dbSNP as Clinically Assoc |
| Mult. SNPs(151) |
| Simple Nucleotide Polymorphisms (dbSNP 151) That Map to Multiple Genomic Loci |
| Mult. SNPs(150) |
| Simple Nucleotide Polymorphisms (dbSNP 150) That Map to Multiple Genomic Loci |
| All SNPs(150) |
| Simple Nucleotide Polymorphisms (dbSNP 150) |
| Common SNPs(150) |
| Simple Nucleotide Polymorphisms (dbSNP 150) Found in >= 1% of Samples |
| Flagged SNPs(150) |
| Simple Nucleotide Polymorphisms (dbSNP 150) Flagged by dbSNP as Clinically Assoc |
| Mult. SNPs(147) |
| Simple Nucleotide Polymorphisms (dbSNP 147) That Map to Multiple Genomic Loci |
| Flagged SNPs(147) |
| Simple Nucleotide Polymorphisms (dbSNP 147) Flagged by dbSNP as Clinically Assoc |
| Common SNPs(147) |
| Simple Nucleotide Polymorphisms (dbSNP 147) Found in >= 1% of Samples |
| All SNPs(147) |
| Simple Nucleotide Polymorphisms (dbSNP 147) |
| Mult. SNPs(146) |
| Simple Nucleotide Polymorphisms (dbSNP 146) That Map to Multiple Genomic Loci |
| Flagged SNPs(146) |
| Simple Nucleotide Polymorphisms (dbSNP 146) Flagged by dbSNP as Clinically Assoc |
| Common SNPs(146) |
| Simple Nucleotide Polymorphisms (dbSNP 146) Found in >= 1% of Samples |
| All SNPs(146) |
| Simple Nucleotide Polymorphisms (dbSNP 146) |
| Mult. SNPs(144) |
| Simple Nucleotide Polymorphisms (dbSNP 144) That Map to Multiple Genomic Loci |
| Flagged SNPs(144) |
| Simple Nucleotide Polymorphisms (dbSNP 144) Flagged by dbSNP as Clinically Assoc |
| Common SNPs(144) |
| Simple Nucleotide Polymorphisms (dbSNP 144) Found in >= 1% of Samples |
| All SNPs(144) |
| Simple Nucleotide Polymorphisms (dbSNP 144) |
| Mult. SNPs(142) |
| Simple Nucleotide Polymorphisms (dbSNP 142) That Map to Multiple Genomic Loci |
| Flagged SNPs(142) |
| Simple Nucleotide Polymorphisms (dbSNP 142) Flagged by dbSNP as Clinically Assoc |
| Common SNPs(142) |
| Simple Nucleotide Polymorphisms (dbSNP 142) Found in >= 1% of Samples |
| All SNPs(142) |
| Simple Nucleotide Polymorphisms (dbSNP 142) |
| Mult. SNPs(141) |
| Simple Nucleotide Polymorphisms (dbSNP 141) That Map to Multiple Genomic Loci |
| Flagged SNPs(141) |
| Simple Nucleotide Polymorphisms (dbSNP 141) Flagged by dbSNP as Clinically Assoc |
| Common SNPs(141) |
| Simple Nucleotide Polymorphisms (dbSNP 141) Found in >= 1% of Samples |
| All SNPs(141) |
| Simple Nucleotide Polymorphisms (dbSNP 141) |
| dbVar Common Struct Var |
| NCBI Curated Common Structural Variants from dbVar |
| dbVar Common SV |
| NCBI dbVar Curated Common Structural Variants |
| dbVar Conflict SV |
| NCBI dbVar Curated Conflict Variants |
| DGV Struct Var |
| Database of Genomic Variants: Structural Variation (CNV, Inversion, In/del) |
| Genome In a Bottle |
| Genome In a Bottle Structural Variants and Trios |
| updated
gnomAD Variants |
| Genome Aggregation Database (gnomAD) Genome and Exome Variants |
| gnomAD v4.1 |
| Genome Aggregation Database (gnomAD) Genome and Exome Variants v4.1 |
| gnomAD v3.1.1 |
| Genome Aggregation Database (gnomAD) Genome Variants v3.1.1 |
| gnomAD v3.1 |
| Genome Aggregation Database (gnomAD) Genome Variants v3.1 |
| gnomAD v3 |
| Genome Aggregation Database (gnomAD) Genome Variants v3 |
|
gnomAD v2 |
| Genome Aggregation Database (gnomAD) Genome and Exome Variants v2.1 |
| gnomAD Mut Constraint |
| Gnocchi: Genome Aggregation Database (gnomAD) non-coding constraint of haploinsufficient variation, includes chrX |
| gnomAD Constraint Metrics |
| Genome Aggregation Database (gnomAD) Predicted Constraint Metrics (LOEUF, pLI, and Z-scores) |
| updated
gnomAD pext |
| Genome Aggregation Database (gnomAD) Proportion Expression Across Transcript Scores (pext) |
| gnomAD Rare CNV Variants |
| Genome Aggregation Database (gnomAD) - Rare CNV variants (<1% overall site frequency) v4.1 |
| gnomAD Structural Variants |
| Genome Aggregation Database (gnomAD) - Structural Variants v4.1 |
| Platinum Genomes |
| Platinum genome variants |
|
|
|
|
|---|
| Multiple Alignment |
| Multiple Alignment on 90 human genome assemblies |
| Pairwise Alignments |
| Human Genomes, Chain/Net pairwise alignments, as mapped by the HPRC project |
| Rearrangements |
| Rearrangements including indels, inversions, and duplications |
| Short Variants |
| Short Variants |
| HPRC All Variants |
| HPRC variants decomposed from hprc-v1.0-mc.grch38.vcfbub.a100k.wave.vcf.gz (Liao et al 2023), no size filtering |
| HPRC Variants <= 3bp |
| HPRC VCF variants filtered for items size <= 3bp |
| HPRC Variants > 3bp |
| HPRC VCF variants filtered for items size > 3bp |
|
|
|
|
|---|
| Human ESTs |
| Human ESTs Including Unspliced |
| Human mRNAs |
| Human mRNAs from GenBank |
| Other ESTs |
| Non-Human ESTs from GenBank |
| Other mRNAs |
| Non-Human mRNAs from GenBank |
| SIB Alt-Splicing |
| Alternative Splicing Graph from Swiss Institute of Bioinformatics |
| Spliced ESTs |
| Human ESTs That Have Been Spliced |
|
|
|
|
|---|
| GTEx Gene V8 |
| Gene Expression in 54 tissues from GTEx RNA-seq of 17382 samples, 948 donors (V8, Aug 2019) |
| GTEx RNA-Seq Coverage |
| GTEx V8 RNA-Seq Read Coverage by Tissue |
| Affy Archive |
| Affymetrix Archive |
| Affy GNF1H |
| Alignments of Affymetrix Consensus/Exemplars from GNF1H |
| Affy U133 |
| Alignments of Affymetrix Consensus/Exemplars from HG-U133 |
| Affy U95 |
| Alignments of Affymetrix Consensus/Exemplars from HG-U95 |
| EPDnew Promoters |
| Promoters from EPDnew |
| GNF Atlas 2 |
| GNF Expression Atlas 2 |
|
GTEx Gene |
| Gene Expression in 53 tissues from GTEx RNA-seq of 8555 samples (570 donors) |
| GTEx Transcript |
| Transcript Expression in 53 tissues from GTEx RNA-seq of 8555 samples/570 donors |
| GWIPS-viz Riboseq |
| Ribosome Profiling from GWIPS-viz |
| miRNA Tissue Atlas |
| Tissue-Specific microRNA Expression from Two Individuals |
| Single Cell Expression |
| Single cell RNA expression levels cell types from many organs |
|
|
|
|
|---|
| Blood (PBMC) Hao |
| Peripheral blood mononuclear cells (PBMC) from Hao et al 2020 |
| Blood PBMC Cells |
| Blood (PBMCs) binned by cell type (level 1) from Hao et al 2020 |
| Blood PBMC Cells 2 |
| Blood PBMCs binned by cell type (level 2) from Hao et al 2020 |
| Blood PBMC Cells 3 |
| Blood PBMCs binned by cell type (level 3) from Hao et al 2020 |
| Blood PBMC Donor |
| Blood PBMCs binned by blood donor from Hao et al 2020 |
| Blood PBMC Phase |
| Blood PBMCs binned by phase of cell cycle from Hao et al 2020 |
| Blood PBMC Time |
| Blood PBMCs binned by time into experiment from Hao et al 2020 |
| Colon Wang |
| Colon single cell sequencing from Wang et al 2020 |
| Colon Cells |
| Colon cells binned by cell type from Wang et al 2020 |
| Colon Donor |
| Colon cells binned by organ donor from Wang et al 2020 |
| Cortex Velmeshev |
| Cerebral cortex single cell data from Velmeshev et al 2019 |
| Cortex Cells |
| Cerebral cortex RNA binned by cell type from Velmeshev et al 2019 |
| Cortex Diagnosis |
| Cerebral cortex RNA binned by ASD/control diagnosis from Velmeshev et al 2019 |
| Cortex Donor |
| Cerebral cortex RNA binned by organ donor from Velmeshev et al 2019 |
| Cortex Sample |
| Cerebral cortex RNA binned by biosample from Velmeshev et al 2019 |
| Cortex Sex |
| Cerebral cortex RNA binned by sex of donor from Velmeshev et al 2019 |
| Cross Tissue Nuclei |
| Single Nuclei sequenced across many tissues |
| Cross Tissue Nuclei |
| Cross tissue nuclei RNA by tissue and cell type |
| Cross Tissue Details |
| Cross tissue nuclei full details |
| GTEx Immune Atlas |
| GTEx single nuclei immune expression |
|
Fetal Gene Atlas |
| Fetal Gene Atlas from Cao et al 2020 |
| Fetal Assay |
| Fetal Gene Atlas binned by assay (cell/nucleus) from Cao et al 2020 |
| Fetal Cells |
| Fetal Gene Atlas binned by cell type from Cao et al 2020 |
| Fetal Donor ID |
| Fetal Gene Atlas binned by donor ID from Cao et al 2020 |
| Fetal Exp |
| Fetal Gene Atlas binned by experiment id from Cao et al 2020 |
| Fetal Lineage |
| Fetal Gene Atlas binned by cell lineage and organ from Cao et al 2020 |
| Fetal Organ |
| Fetal Gene Atlas binned by organ from Cao et al 2020 |
| Fetal RT Group |
| Fetal Gene Atlas binned by RT group from Cao et al 2020 |
| Fetal Sex |
| Fetal Gene Atlas binned by sex from Cao et al 2020 |
| Heart Cell Atlas |
| Heart single cell RNA data from https://heartcellatlas.com |
| Heart HCA Age |
| Heart cell RNA binned by age group of donor from https://heartcellatlas.org |
| Heart HCA Cells |
| Heart cell RNA binned by cell type from https://heartcellatlas.org |
| Heart HCA Donor |
| Heart cell RNA binned by organ donor from https://heartcellatlas.org |
| Heart HCA Region |
| Heart cell RNA binned by region of collection from https://heartcellatlas.org |
| Heart HCA Sample |
| Heart cell RNA binned by biosample from https://heartcellatlas.org |
| Heart HCA Sex |
| Heart cell RNA binned by sex of donor from https://heartcellatlas.org |
| Heart HCA Source |
| Heart cell RNA binned by source (nucleus vs whole cell) from https://heartcellatlas.org |
| Heart HCA State |
| Heart cell RNA binned by cell state from https://heartcellatlas.org |
| Heart HCA Version |
| Heart cell RNA binned by 10x chemistry version from https://heartcellatlas.org |
| Ileum Wang |
| Ileum single cell sequencing from Wang et al 2020 |
| Ileum Cells |
| Ileum cells binned by cell type from Wang et al 2020 |
| Ileum Donor |
| Ileum cells binned by organ donor from Wang et al 2020 |
| Kidney Stewart |
| Kidney single cell data from Stewart et al 2019 |
| Kidney Broad CT |
| Kidney RNA binned by broad cell type from Stewart et al 2019 |
| Kidney Cells |
| Kidney RNA binned by merged cell type from Stewart et al 2019 |
| Kidney Compartment |
| Kidney RNA binned by compartment from Stewart et al 2019 |
| Kidney Details |
| Kidney RNA binned by detailed cell type from Stewart et al 2019 |
| Kidney Experiment |
| Kidney RNA binned by Experiment from Stewart et al 2019 |
| Kidney Project |
| Kidney RNA binned by project from Stewart et al 2019 |
| Liver MacParland |
| Liver single cell sequencing from MacParland et al 2018 |
| Liver Broad |
| Liver cells binned by broad cell type from MacParland et al 2018 |
| Liver Cells |
| Liver cells binned by cell type from MacParland et al 2018 |
| Liver Donor |
| Liver cells binned by organ donor from MacParland et al 2018 |
| Lung Travaglini |
| Lung cells from from Travaglini et al 2020 |
| Lung Cells |
| Lung cells 10x method binned by merged cell type from Travaglini et al 2020 |
| Lung Cells FACS |
| Lung cells FACS method binned by merged cell type from Travaglini et al 2020 |
| Lung Compart |
| Lung cells 10x method binned by compartment from Travaglini et al 2020 |
| Lung Compart FACS |
| Lung cells FACS method binned by compartment from Travaglini et al 2020 |
| Lung Detail |
| Lung cells 10x method binned by detailed cell type from Travaglini et al 2020 |
| Lung Detail FACS |
| Lung cells FACS method binned by detailed cell type from Travaglini et al 2020 |
| Lung Donor |
| Lung cells 10x method binned by organ donor from Travaglini et al 2020 |
| Lung Donor FACS |
| Lung cells FACS method binned by organ donor from Travaglini et al 2020 |
| Lung Gating FACS |
| Lung cells FACS method binned by gating from Travaglini et al 2020 |
| Lung Half Det |
| Lung cells 10x method binned by halfway detailed cell type from Travaglini et al 2020 |
| Lung Half Det FACS |
| Lung cells FACS method binned by merged cell type from Travaglini et al 2020 |
| Lung Label FACS |
| Lung cells FACS method binned by label from Travaglini et al 2020 |
| Lung Locat |
| Lung cells 10x method binned by location from Travaglini et al 2020 |
| Lung Locat FACS |
| Lung cells FACS method binned by location from Travaglini et al 2020 |
| Lung Mag Sel |
| Lung cells 10x method binned by magnetic.selection from Travaglini et al 2020 |
| Lung Organ |
| Lung cells 10x method binned by organ from Travaglini et al 2020 |
| Lung Organ FACS |
| Lung cells FACS method binned by organ from Travaglini et al 2020 |
| Lung Sample |
| Lung cells 10x method binned by sample from Travaglini et al 2020 |
| Lung Sample FACS |
| Lung cells FACS method binned by sample from Travaglini et al 2020 |
| Muscle De Micheli |
| Muscle single cell data from De Micheli et al 2020 |
| Muscle Cells |
| Muscle RNA binned by cell type from De Micheli et al 2020 |
| Muscle Sample |
| Muscle RNA binned by biosample from De Micheli et al 2020 |
| Pancreas Baron |
| Pancreas single cell sequencing from Baron et al 2016 |
| Pancreas Batch |
| Pancreas cells binned by batch from Baron et al 2016 |
| Pancreas Cells |
| Pancreas cells binned by cell type from Baron et al 2016 |
| Pancreas Details |
| Pancreas cells binned by detailed cell type from Baron et al 2016 |
| Pancreas Donor |
| Pancreas cells binned by organ donor from Baron et al 2016 |
| Placenta Vento-Tormo |
| Placenta and decidua cells from from Vento-Tormo et al 2018 |
| Placenta Cells |
| Placenta and decidua cells binned by cell type 10x from Vento-Tormo et al 2018 |
| Placenta Cells Ss2 |
| Placenta and decidua cells binned by cell type smart-seq2 from Vento-Tormo et al 2018 |
| Placenta Detail |
| Placenta and decidua cells binned by detailed cell type 10x from Vento-Tormo et al 2018 |
| Placenta Detail Ss2 |
| Placenta and decidua cells binned by detailed cell type smart-seq2 from Vento-Tormo et al 2018 |
| Placenta Loc |
| Placenta and decidua cells binned by cell location 10x from Vento-Tormo et al 2018 |
| Placenta Loc Ss2 |
| Placenta and decidua cells binned by cell location smart-seq2 from Vento-Tormo et al 2018 |
| Placenta Mat/Fet |
| Placenta and decidua cells binned by maternal/fetal 10x from Vento-Tormo et al 2018 |
| Placenta Mat/Fet Ss2 |
| Placenta and decidua cells binned by maternal/fetal smart-seq2 from Vento-Tormo et al 2018 |
| Placenta Stage |
| Placenta and decidua cells binned by placental stage 10x from Vento-Tormo et al 2018 |
| Rectum Wang |
| Rectum single cell sequencing from Wang et al 2020 |
| Rectum Cells |
| Rectum cells binned by cell type from Wang et al 2020 |
| Rectum Donor |
| Rectum cells binned by organ donor from Wang et al 2020 |
|
Skin Sole-Boldo |
| Skin single cell data from Sole-Boldo et al 2020 |
| Skin Age |
| Skin single cell RNA binned by skin donor's age from Sole-Boldo et al 2020 |
| Skin Cell |
| Skin single cell RNA binned by cell type from Sole-Boldo et al 2020 |
| Skin Cell+Age |
| Skin single cell RNA binned by cell type and donor's age from Sole-Boldo et all 2020 |
| Skin Donor |
| Skin single cell RNA binned by skin donor from Sole-Boldo et al 2020 |
| Tabula Sapiens |
| Tabula Sapiens single cell RNA data from many tissues |
| Tabula Details |
| Tabula sapiens full details view |
| Tabula Tissue Cell |
| Tabula sapiens RNA by tissue and cell type |
|
|
|
|
|---|
| ENCODE cCREs |
| ENCODE Candidate Cis-Regulatory Elements (cCREs) combined from all cell types |
| ENCODE Regulation |
| Integrated Regulation from ENCODE |
| TF rPeak Clusters |
| Transcription Factor Representative Peak (rPeak) Clusters (912 factors in 1152 biosamples) from ENCODE 4 |
|
Transcription |
| Transcription Levels Assayed by RNA-seq on 9 Cell Lines from ENCODE |
|
Layered H3K4Me1 |
| H3K4Me1 Mark (Often Found Near Regulatory Elements) on 7 cell lines from ENCODE |
|
Layered H3K4Me3 |
| H3K4Me3 Mark (Often Found Near Promoters) on 7 cell lines from ENCODE |
|
Layered H3K27Ac |
| H3K27Ac Mark (Often Found Near Regulatory Elements) on 7 cell lines from ENCODE |
| DNase Clusters |
| DNase I Hypersensitivity Peak Clusters from ENCODE (95 cell types) |
| DNase Signal |
| DNase I Hypersensitivity Signal Colored by Similarity from ENCODE |
| DNase HS |
| DNase I Hypersensitivity in 95 cell types from ENCODE |
| TF Clusters |
| Transcription Factor ChIP-seq Clusters (340 factors, 129 cell types) from ENCODE 3 |
| TF ChIP |
| Transcription Factor ChIP-seq Peaks (340 factors in 129 cell types) from ENCODE 3 |
| CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
| CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
| Unmasked CpG |
| CpG Islands on All Sequence (Islands < 300 Bases are Light Green) |
| FANTOM5 |
| FANTOM5: Mapped transcription start sites (TSS) and their usage |
| TSS peaks |
| FANTOM5: DPI peak, robust set |
| Total counts of CAGE reads |
| FANTOM5: Total counts of CAGE reads |
| Max counts of CAGE reads |
| FANTOM5: Max counts of CAGE reads |
| TSS activity - read counts |
| FANTOM5: TSS activity per sample read counts |
| TSS activity (TPM) |
| FANTOM5: TSS activity per sample (TPM) |
| GeneHancer |
| GeneHancer Regulatory Elements and Gene Interactions |
| GTEx cis-eQTLs |
| GTEx fine-mapped cis-eQTLs |
| Hi-C and Micro-C |
| Comparison of Micro-C and In situ Hi-C protocols in H1-hESC and HFFc6 |
| JASPAR Transcription Factors |
| JASPAR Transcription Factor Binding Site Database |
| ORegAnno |
| Regulatory elements from ORegAnno |
| RefSeq Func Elems |
| NCBI RefSeq Functional Elements |
| ReMap ChIP-seq |
| ReMap Atlas of Regulatory Regions |
| updated
VISTA Enhancers |
| VISTA Enhancers |
|
|
|
|
|---|
| UCSC 100 Vertebrates |
| UCSC 100 Vertebrates - 100 vertebrate genomes aligned with MultiZ by the UCSC Browser Group |
| Zoonomia 241 Placent |
| Zoonomia Alignment - 241 Placental Mammal Genomes aligned by the Zoonomia Project with Cactus |
| UCSC 30 Primates |
| UCSC 30 Primates - 30 primate genomes aligned with MultiZ by the UCSC Browser Group |
| Primate Chain/Net |
| Primate Genomes, Chain and Net Alignments |
| Placental Chain/Net |
| Non-primate Placental Mammal Genomes, Chain and Net Alignments |
| Vertebrate Chain/Net |
| Non-placental Vertebrate Genomes, Chain and Net Alignments |
| CHM13 alignments |
| CHM13 (GCA_009914755.4) v1_nfLO liftOver alignments |
| Hiller Lab 470 Mammals |
| Hiller Lab 470 Mammals - 470 mammalian genomes aligned with Multiz by Michael Hiller's Group, |
| Zoonomia+Primates 447 |
| Zoonomia+Primates 447 - 447 mammals, including 233 primates, aligned with Cactus, for Kuderna et al. 2023 |
|
|
|
|
|---|
| RepeatMasker |
| Repeating Elements by RepeatMasker |
| Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
| Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
| NuMTs Sequence |
| Nuclear mitochondrial DNA segments |
| RepeatMasker Viz. |
| Detailed Visualization of RepeatMasker Annotations |
| Segmental Dups |
| Duplications of >1000 Bases of Non-RepeatMasked Sequence |
| Self Alignment |
| Human Chained Self Alignments |
| Simple Repeats |
| Simple Tandem Repeats by TRF |
| WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
|
|
|
|
|---|
| HGSVC & HPRC SV |
| HGSVC & HPRC SV map |
|
|
|
|
|---|
| canvas_case_ssc_cnv_trueset |
| canvas_case_ssc_cnv_trueset |
| canvas_ctrl_ssc_cnv_trueset |
| canvas_ctrl_ssc_cnv_trueset |
| CNVnator100_case_ssc_cnv_trueset |
| CNVnator100_case_ssc_cnv_trueset |
| CNVnator100_ctrl_ssc_cnv_trueset |
| CNVnator100_ctrl_ssc_cnv_trueset |
| lumpy_case_ssc_cnv_trueset |
| lumpy_case_ssc_cnv_trueset |
| lumpy_ctrl_ssc_cnv_trueset |
| lumpy_ctrl_ssc_cnv_trueset |
| manta_case_ssc_cnv_trueset |
| manta_case_ssc_cnv_trueset |
| manta_ctrl_ssc_cnv_trueset |
| manta_ctrl_ssc_cnv_trueset |
| pav_case_ssc_cnv_trueset |
| pav_case_ssc_cnv_trueset |
| pav_ctrl_ssc_cnv_trueset |
| pav_ctrl_ssc_cnv_trueset |
| pbsv_case_ssc_cnv_trueset |
| pbsv_case_ssc_cnv_trueset |
| pbsv_ctrl_ssc_cnv_trueset |
| pbsv_ctrl_ssc_cnv_trueset |
| 4 way merge [CNVnator, Lumpy, CANVAS, MANTA] |
| 4 way merge [CNVnator, Lumpy, CANVAS, MANTA] |
| individual CNV callers |
| individual CNV callers |
| CANVAS |
| CANVAS |
| CNVnator |
| CNVnator |
| Delly |
| Delly |
| GenomeStrip |
| GenomeStrip |
| Lumpy |
| Lumpy |
| MANTA |
| MANTA |
| WHAMG |
| WHAMG |
| per sample calls |
| per sample calls |
| 11003_fa |
| 11003_fa |
| 11003_mo |
| 11003_mo |
| 11003_p1 |
| 11003_p1 |
| 11003_s1 |
| 11003_s1 |
| 11004_fa |
| 11004_fa |
| 11004_mo |
| 11004_mo |
| 11004_p1 |
| 11004_p1 |
| 11004_s1 |
| 11004_s1 |
| 11006_fa |
| 11006_fa |
| 11006_mo |
| 11006_mo |
| 11006_p1 |
| 11006_p1 |
| 11006_s1 |
| 11006_s1 |
| 11008_fa |
| 11008_fa |
| 11008_mo |
| 11008_mo |
| 11008_p1 |
| 11008_p1 |
| 11008_s1 |
| 11008_s1 |
| 11009_fa |
| 11009_fa |
| 11009_mo |
| 11009_mo |
| 11009_p1 |
| 11009_p1 |
| 11009_s1 |
| 11009_s1 |
| 11010_fa |
| 11010_fa |
| 11010_mo |
| 11010_mo |
| 11010_p1 |
| 11010_p1 |
| 11010_s1 |
| 11010_s1 |
| 11012_fa |
| 11012_fa |
| 11012_mo |
| 11012_mo |
| 11012_p1 |
| 11012_p1 |
| 11012_s1 |
| 11012_s1 |
| 11013_fa |
| 11013_fa |
| 11013_mo |
| 11013_mo |
| 11013_p1 |
| 11013_p1 |
| 11013_s1 |
| 11013_s1 |
| 11014_fa |
| 11014_fa |
| 11014_mo |
| 11014_mo |
| 11014_p1 |
| 11014_p1 |
| 11014_s1 |
| 11014_s1 |
| 11017_fa |
| 11017_fa |
| 11017_mo |
| 11017_mo |
| 11017_p1 |
| 11017_p1 |
| 11017_s1 |
| 11017_s1 |
| 11018_fa |
| 11018_fa |
| 11018_mo |
| 11018_mo |
| 11018_p1 |
| 11018_p1 |
| 11018_s1 |
| 11018_s1 |
| 11022_fa |
| 11022_fa |
| 11022_mo |
| 11022_mo |
| 11022_p1 |
| 11022_p1 |
| 11022_s1 |
| 11022_s1 |
| 11023_fa |
| 11023_fa |
| 11023_mo |
| 11023_mo |
| 11023_p1 |
| 11023_p1 |
| 11023_s1 |
| 11023_s1 |
| 11024_fa |
| 11024_fa |
| 11024_mo |
| 11024_mo |
| 11024_p1 |
| 11024_p1 |
| 11024_s1 |
| 11024_s1 |
| 11027_fa |
| 11027_fa |
| 11027_mo |
| 11027_mo |
| 11027_p1 |
| 11027_p1 |
| 11027_s1 |
| 11027_s1 |
| 11028_fa |
| 11028_fa |
| 11028_mo |
| 11028_mo |
| 11028_p1 |
| 11028_p1 |
| 11028_s1 |
| 11028_s1 |
| 11029_fa |
| 11029_fa |
| 11029_mo |
| 11029_mo |
| 11029_p1 |
| 11029_p1 |
| 11029_s1 |
| 11029_s1 |
| 11030_fa |
| 11030_fa |
| 11030_mo |
| 11030_mo |
| 11030_p1 |
| 11030_p1 |
| 11030_s1 |
| 11030_s1 |
| 11031_fa |
| 11031_fa |
| 11031_mo |
| 11031_mo |
| 11031_p1 |
| 11031_p1 |
| 11031_s1 |
| 11031_s1 |
| 11033_fa |
| 11033_fa |
| 11033_mo |
| 11033_mo |
| 11033_p1 |
| 11033_p1 |
| 11033_s1 |
| 11033_s1 |
| 11037_fa |
| 11037_fa |
| 11037_mo |
| 11037_mo |
| 11037_p1 |
| 11037_p1 |
| 11037_s1 |
| 11037_s1 |
| 11038_fa |
| 11038_fa |
| 11038_mo |
| 11038_mo |
| 11038_p1 |
| 11038_p1 |
| 11038_s1 |
| 11038_s1 |
| 11041_fa |
| 11041_fa |
| 11041_mo |
| 11041_mo |
| 11041_p1 |
| 11041_p1 |
| 11041_s1 |
| 11041_s1 |
| 11042_fa |
| 11042_fa |
| 11042_mo |
| 11042_mo |
| 11042_p1 |
| 11042_p1 |
| 11042_s1 |
| 11042_s1 |
| 11043_fa |
| 11043_fa |
| 11043_mo |
| 11043_mo |
| 11043_p1 |
| 11043_p1 |
| 11043_s1 |
| 11043_s1 |
| 11045_fa |
| 11045_fa |
| 11045_mo |
| 11045_mo |
| 11045_p1 |
| 11045_p1 |
| 11045_s1 |
| 11045_s1 |
| 11046_fa |
| 11046_fa |
| 11046_mo |
| 11046_mo |
| 11046_p1 |
| 11046_p1 |
| 11046_s1 |
| 11046_s1 |
| 11047_fa |
| 11047_fa |
| 11047_mo |
| 11047_mo |
| 11047_p1 |
| 11047_p1 |
| 11047_s1 |
| 11047_s1 |
| 11048_fa |
| 11048_fa |
| 11048_mo |
| 11048_mo |
| 11048_p1 |
| 11048_p1 |
| 11048_s1 |
| 11048_s1 |
| 11051_fa |
| 11051_fa |
| 11051_mo |
| 11051_mo |
| 11051_p1 |
| 11051_p1 |
| 11051_s1 |
| 11051_s1 |
| 11054_fa |
| 11054_fa |
| 11054_mo |
| 11054_mo |
| 11054_p1 |
| 11054_p1 |
| 11054_s1 |
| 11054_s1 |
| 11055_fa |
| 11055_fa |
| 11055_mo |
| 11055_mo |
| 11055_p1 |
| 11055_p1 |
| 11055_s1 |
| 11055_s1 |
| 11056_fa |
| 11056_fa |
| 11056_mo |
| 11056_mo |
| 11056_p1 |
| 11056_p1 |
| 11056_s1 |
| 11056_s1 |
| 11057_fa |
| 11057_fa |
| 11057_mo |
| 11057_mo |
| 11057_p1 |
| 11057_p1 |
| 11057_s1 |
| 11057_s1 |
| 11060_fa |
| 11060_fa |
| 11060_mo |
| 11060_mo |
| 11060_p1 |
| 11060_p1 |
| 11060_s1 |
| 11060_s1 |
| 11062_fa |
| 11062_fa |
| 11062_mo |
| 11062_mo |
| 11062_p1 |
| 11062_p1 |
| 11062_s1 |
| 11062_s1 |
| 11063_fa |
| 11063_fa |
| 11063_mo |
| 11063_mo |
| 11063_p1 |
| 11063_p1 |
| 11063_s1 |
| 11063_s1 |
| 11064_fa |
| 11064_fa |
| 11064_mo |
| 11064_mo |
| 11064_p1 |
| 11064_p1 |
| 11064_s1 |
| 11064_s1 |
| 11066_fa |
| 11066_fa |
| 11066_mo |
| 11066_mo |
| 11066_p1 |
| 11066_p1 |
| 11066_s1 |
| 11066_s1 |
| 11067_fa |
| 11067_fa |
| 11067_mo |
| 11067_mo |
| 11067_p1 |
| 11067_p1 |
| 11067_s1 |
| 11067_s1 |
| 11069_fa |
| 11069_fa |
| 11069_mo |
| 11069_mo |
| 11069_p1 |
| 11069_p1 |
| 11069_s1 |
| 11069_s1 |
| 11071_fa |
| 11071_fa |
| 11071_mo |
| 11071_mo |
| 11071_p1 |
| 11071_p1 |
| 11071_s1 |
| 11071_s1 |
| 11073_fa |
| 11073_fa |
| 11073_mo |
| 11073_mo |
| 11073_p1 |
| 11073_p1 |
| 11073_s1 |
| 11073_s1 |
| 14455_fa |
| 14455_fa |
| 14455_mo |
| 14455_mo |
| 14455_p1 |
| 14455_p1 |
| 14455_s1 |
| 14455_s1 |
|
|