Control track and group visibility more selectively below.
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| JASPAR2020 TFBS ce10 |
| TFBS predictions in Caenorhabditis elegans (ce10) for all profiles in the JASPAR CORE nematodes collection (2020) |
| JASPAR2022 TFBS ce10 |
| TFBS predictions in Caenorhabditis elegans (ce10) for all profiles in the JASPAR CORE nematodes collection (2022) |
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| Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
| Assembly |
| Assembly from Fragments |
| Gap |
| Gap Locations |
| GC Percent |
| GC Percent in 5-Base Windows |
| Restr Enzymes |
| Restriction Enzymes from REBASE |
| Short Match |
| Perfect Matches to Short Sequence () |
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| RefSeq Genes |
| RefSeq Genes |
| AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
| CRISPR |
| CRISPR/Cas9 Sp. Pyog. target sites |
| CRISPR Regions |
| Genome regions processed to find CRISPR/Cas9 target sites (exons +/- 200 bp) |
| CRISPR Targets |
| CRISPR/Cas9 -NGG Targets |
| Ensembl Genes |
| Ensembl Genes |
| Human Proteins |
| Human Proteins Mapped by Chained tBLASTn |
| Other RefSeq |
| Non-C. elegans RefSeq Genes |
| UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
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| Web Sequences |
| DNA Sequences in Web Pages Indexed by Bing.com / Microsoft Research |
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| Spliced ESTs |
| C. elegans ESTs That Have Been Spliced |
| C. elegans ESTs |
| C. elegans ESTs Including Unspliced |
| C. elegans mRNAs |
| C. elegans mRNAs from GenBank |
| Other mRNAs |
| Non-C. elegans mRNAs from GenBank |
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| Conservation |
| Nematode Multiz Alignment & Conservation (7 Species) |
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| Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
| Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
| Simple Repeats |
| Simple Tandem Repeats by TRF |
| UniProt Variants |
| UniProt/SwissProt Amino Acid Substitutions |
| RepeatMasker |
| Repeating Elements by RepeatMasker |
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