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Configure Tracks on UCSC Genome Browser: S. cerevisiae Apr. 2011 (SacCer_Apr2011/sacCer3)
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-   Peterhof_yeasts    
15V amplified Regions amplified in 15V-P4
15V deletions Regions deleted in 15V-P4
15V-P4_indels Indels in 15V-P4
15V_P4 Single nucleotide variation in 15V-P4
1B amplified Regions amplified in 1B-D1606
1B deleted Regions deleted in 1B-D1606
1B-D1606-indels Indels in 1B-D1606
1B_D1606 Single nucleotide variation in 1B-D1606
222 amplified Regions amplified in 222-1B-D1606
222 deletions Regions deleted in 222-1B-D1606
222_1B_D1606 Single nucleotide variation in 222-1B-D1606
25-25 amplified Regions amplified in 25-25-2V-P3982
25-25 deleted Regions deleted in 25-25-2V-P3982
25_25_P3982 Single nucleotide variation in 25-25-2V-P3982
25_25_P3982_indels Indels in 25-25-2V-P3982
6P-33G amplified Regions amplified in 6P-33G-D373
6P-33G deleted Regions deleted in 6P-33G-D373
6P-33G-D373 Single nucleotide variation in 6P-33G-D373
6P_33G_D373_indels Indels in 6P-33G-D373
74 amplified Regions amplified in 74-D694
74 deleted Regions deleted in 74-D694
74-D694-indels Indels in 74-D694
74_D694 Single nucleotide variation in 74-D694
A1-K5-35B-D924 Single nucleotide variation in A1-K5-35B-D924
D273-10B Single nucleotide variation in D273-10B
indels_D273-10B Indels in D273-10B
indels_YPH499 Indels in YPH499
nm126-A1-K5-35B-D924 Single nucleotide variation in nm126-A1-K5-35B-D924
YPH499 Single nucleotide variation in YPH499
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
WashU Clones Washington University Clones
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
NCBI RefSeq RefSeq genes from NCBI
SGD Genes Protein-Coding Genes from Saccharomyces Genome Database
SGD Other Other Features from Saccharomyces Genome Database
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
CRISPR CRISPR/Cas9 Sp. Pyog. target sites
     CRISPR Regions     Genome regions processed to find CRISPR/Cas9 target sites (exons +/- 200 bp)
     CRISPR Targets     CRISPR/Cas9 -NGG Targets
Ensembl Genes Ensembl Genes
Human Proteins Human Proteins Mapped by Chained tBLASTn
Other RefSeq Non-S. cerevisiae RefSeq Genes
UniProt UniProt SwissProt/TrEMBL Protein Annotations
-   mRNA and EST    
S. cer. ESTs S. cerevisiae ESTs Including Unspliced
S. cer. mRNAs S. cerevisiae mRNAs from GenBank
Spliced ESTs S. cerevisiae ESTs That Have Been Spliced
-   Expression and Regulation    
Regulatory Code Transcriptional Regulatory Code from Harbison Gordon et al.
Reg. ChIP-chip ChIP-chip Results from Harbison Gordon et al.
ORegAnno Regulatory elements from ORegAnno
Reg. Module Eran Segal Regulatory Module
-   Comparative Genomics    
Conservation Multiz Alignment & Conservation (7 Yeasts)
-   Variation and Repeats    
updated EVA SNP Short Genetic Variants from European Variant Archive
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF