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Configure Tracks on UCSC Genome Browser: Horse Sep. 2007 (Broad/equCab2)
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-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Scaffolds Assembly Scaffolds
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Horse QTL Horse Quantitative Trait Loci from animalQTLdb
Quality Scores Horse Sequencing Quality Scores
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
RefSeq Genes RefSeq Genes
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Ensembl Genes Ensembl Genes
Geneid Genes Geneid Gene Predictions
Genscan Genes Genscan Gene Predictions
Human Proteins Human Proteins Mapped by Chained tBLASTn
N-SCAN N-SCAN Gene Predictions
Other RefSeq Non-Horse RefSeq Genes
TransMap V5 TransMap Alignments Version 5
     TransMap Ensembl     TransMap Ensembl and GENCODE Mappings Version 5
     TransMap RefGene     TransMap RefSeq Gene Mappings Version 5
     TransMap RNA     TransMap GenBank RNA Mappings Version 5
     TransMap ESTs     TransMap EST Mappings Version 5
tRNA Genes Transfer RNA Genes Identified with tRNAscan-SE
-   mRNA and EST    
Horse ESTs Horse ESTs Including Unspliced
Horse mRNAs Horse mRNAs from GenBank
Other mRNAs Non-Horse mRNAs from GenBank
Spliced ESTs Horse ESTs That Have Been Spliced
-   Comparative Genomics    
Dog Chain/Net Dog (May 2005 (Broad/canFam2)), Chain and Net Alignments
Sheep Chain/Net Sheep (Feb. 2010 (ISGC Ovis_aries_1.0/oviAri1)), Chain and Net Alignments
Cow Chain/Net Cow (Jun. 2014 (Bos_taurus_UMD_3.1.1/bosTau8)), Chain and Net Alignments
Mouse Chain/Net Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments
Chimp Chain/Net Chimp (Oct. 2010 (CGSC 2.1.3/panTro3)), Chain and Net Alignments
hg19 Chain/Net Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments
hg38 Chain/Net Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments
Opossum Chain/Net Opossum (Oct. 2006 (Broad/monDom5)), Chain and Net Alignments
Platypus Chain/Net Platypus (Mar. 2007 (WUGSC 5.0.1/ornAna1)), Chain and Net Alignments
Chicken Chain/Net Chicken (May 2006 (WUGSC 2.1/galGal3)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
Interrupted Rpts Fragments of Interrupted Repeats Joined by RepeatMasker ID
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF