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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
GC Percent |
| GC Percent in 5-Base Windows |
INSDC |
| Accession at INSDC - International Nucleotide Sequence Database Collaboration |
RefSeq Acc |
| RefSeq Accession |
Restr Enzymes |
| Restriction Enzymes from REBASE |
Short Match |
| Perfect Matches to Short Sequence () |
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AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
CRISPR 10K |
| CRISPR/Cas9 Sp. Pyog. target sites (exons +/- 10,000 bp) |
CRISPR Regions 10K |
| Genome regions processed to find CRISPR/Cas9 target sites (exons +/- 10,000 bp) |
CRISPR Targets 10K |
| CRISPR/Cas9 -NGG Targets (exons +/- 10,000 bp) |
Ensembl Genes |
| Ensembl Genes |
Genscan Genes |
| Genscan Gene Predictions |
Other RefSeq |
| Non-A. gambiae RefSeq Genes |
UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
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A. gambiae ESTs |
| A. gambiae ESTs Including Unspliced |
A. gambiae mRNAs |
| A. gambiae mRNAs from GenBank |
Other mRNAs |
| Non-A. gambiae mRNAs from GenBank |
Spliced ESTs |
| A. gambiae ESTs That Have Been Spliced |
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CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
Unmasked CpG |
| CpG Islands on All Sequence (Islands < 300 Bases are Light Green) |
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D. melanogaster Chain/Net |
| D. melanogaster (Aug. 2014 (BDGP Release 6 + ISO1 MT/dm6)), Chain and Net Alignments |
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RepeatMasker |
| Repeating Elements by RepeatMasker |
new
EVA SNP |
| Short Genetic Variants from European Variant Archive |
Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
Simple Repeats |
| Simple Tandem Repeats by TRF |
WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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