Control track and group visibility more selectively below.
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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Contigs |
| Assembly Contigs |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
GC Percent |
| GC Percent in 5-Base Windows |
Quality Scores |
| C. remanei Sequencing Quality Scores |
Restr Enzymes |
| Restriction Enzymes from REBASE |
Short Match |
| Perfect Matches to Short Sequence () |
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AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
Other RefSeq |
| Non-C. remanei RefSeq Genes |
tRNA Genes |
| Transfer RNA Genes Identified with tRNAscan-SE |
UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
C.elegans Prot. |
| C. elegans Proteins WS190 Mapped by Chained tBLASTn |
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Spliced ESTs |
| C. remanei ESTs That Have Been Spliced |
C. remanei ESTs |
| C. remanei ESTs Including Unspliced |
C. remanei mRNAs |
| C. remanei mRNAs from GenBank |
Other mRNAs |
| Non-C. remanei mRNAs from GenBank |
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C. elegans Chain |
| C. elegans (May 2008 (WS190/ce6)) Chained Alignments |
C. elegans Net |
| C. elegans (May 2008 (WS190/ce6)) Alignment Net |
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Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
Simple Repeats |
| Simple Tandem Repeats by TRF |
UniProt Variants |
| UniProt/SwissProt Amino Acid Substitutions |
WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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