Rrattus_CSIRO_v1 Mar. 2020 hub_77_GCF_011064425.1 NC_046154.1:90,983,296-90,993,296 UCSC Genome Browser v438

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UCSC Genome Browser on Rrattus_CSIRO_v1 Mar. 2020 black rat (GCF_011064425.1)
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chr1:90,983,296-90,993,296 10,001 bp.

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Click on a feature for details. Shift+click+drag to zoom in. Click grey side bars for track options. Drag side bars or labels up or down to reorder tracks. Drag tracks left or right to new position. Press "?" for keyboard shortcuts. Use drop-down controls below and press refresh to alter tracks displayed.

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Mapping and Sequencing

Tandem Dups

Genes and Gene Predictions

NCBI RefSeq

Augustus

TOGA vs. hg38

mRNA and EST

RefSeq mRNAs

Expression and Regulation

CpG Islands

Variation and Repeats

RepeatMasker

Simple Repeats

WM + SDust

left 10%	ctrl+j	track search	t then s
left 1/2 screen	j	default tracks	d then t
left one screen	J	default order	d then o
right 10%	ctrl+l	hide all	h then a
right 1/2 screen	l	custom tracks	c then t
right one screen	L	track collections	t then c
jump to position box	/	track hubs	t then h
zoom in 1.5x	ctrl+i	configure	c then f
zoom in 3x	i	reverse	r then v
zoom in 10x	I	resize	r then s
zoom in base level	b	refresh	r then f
zoom out 1.5x	ctrl+k	view chrom names	v then s
zoom out 3x	k	send to external tool	s then t
zoom out 10x	K	exon view	e then v
zoom out 100x	0	default view	d then v
zoom to ...		view DNA	v then d
50bp (1 zero)	1	Reset all User Settings	c then r
500bp (2 zeros)	2	Tools - BLAT	t then b
5000bp (3 zeros)	3	Tools - Table Browser	t then t
50kbp (4 zeros)	4	Tools - PCR	t then i
500kbp (5 zeros)	5	My Sessions	s then s
5Mbp (6 zeros)	6	Public Sessions	p then s
Highlight all (mark)	h then m	Clear all Highlights	h then c