Control track and group visibility more selectively below.
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| Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
| Assembly |
| Assembly from Fragments |
| Gap |
| Gap Locations |
| GC Percent |
| GC Percent in 5-Base Windows |
| INSDC |
| Accession at INSDC - International Nucleotide Sequence Database Collaboration |
| RefSeq Acc |
| RefSeq Accession |
| Restr Enzymes |
| Restriction Enzymes from REBASE |
| Short Match |
| Perfect Matches to Short Sequence () |
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| NCBI RefSeq |
| RefSeq genes from NCBI |
| AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
| Ensembl Genes |
| Ensembl Genes |
| Genscan Genes |
| Genscan Gene Predictions |
| Other RefSeq |
| Non-Tarsier RefSeq Genes |
| TOGA vs. hg38 |
| TOGA annotations using human/hg38 as reference |
| TransMap V5 |
| TransMap Alignments Version 5 |
| TransMap Ensembl |
| TransMap Ensembl and GENCODE Mappings Version 5 |
| TransMap RefGene |
| TransMap RefSeq Gene Mappings Version 5 |
| TransMap RNA |
| TransMap GenBank RNA Mappings Version 5 |
| TransMap ESTs |
| TransMap EST Mappings Version 5 |
| UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
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| Tarsier mRNAs |
| Tarsier mRNAs from GenBank |
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| CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
| CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
| Unmasked CpG |
| CpG Islands on All Sequence (Islands < 300 Bases are Light Green) |
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| Conservation |
| Multiz Alignment & Conservation (20 Species) |
| Squirrel monkey Chain/Net |
| Squirrel monkey (Oct. 2011 (Broad/saiBol1)), Chain and Net Alignments |
| Rat Chain/Net |
| Rat (Jul. 2014 (RGSC 6.0/rn6)), Chain and Net Alignments |
| Marmoset Chain/Net |
| Marmoset (March 2009 (WUGSC 3.2/calJac3)), Chain and Net Alignments |
| Golden snub-nosed monkey Chain/Net |
| Golden snub-nosed monkey (Oct. 2014 (Rrox_v1/rhiRox1)), Chain and Net Alignments |
| Proboscis monkey Chain/Net |
| Proboscis monkey (Nov. 2014 (Charlie1.0/nasLar1)), Chain and Net Alignments |
| Green monkey Chain/Net |
| Green monkey (Mar. 2014 (Chlorocebus_sabeus 1.1/chlSab2)), Chain and Net Alignments |
| Baboon Chain/Net |
| Baboon (Mar. 2012 (Baylor Panu_2.0/papAnu2)), Chain and Net Alignments |
| Crab-eating macaque Chain/Net |
| Crab-eating macaque (Jun. 2013 (Macaca_fascicularis_5.0/macFas5)), Chain and Net Alignments |
| Rhesus Chain/Net |
| Rhesus (Oct. 2010 (BGI CR_1.0/rheMac3)), Chain and Net Alignments |
| Gibbon Chain/Net |
| Gibbon (Oct. 2012 (GGSC Nleu3.0/nomLeu3)), Chain and Net Alignments |
| Orangutan Chain/Net |
| Orangutan (July 2007 (WUGSC 2.0.2/ponAbe2)), Chain and Net Alignments |
| Gorilla Chain/Net |
| Gorilla (May 2011 (gorGor3.1/gorGor3)), Chain and Net Alignments |
| Bonobo Chain/Net |
| Bonobo (May 2012 (Max-Planck/panPan1)), Chain and Net Alignments |
| Chimp Chain/Net |
| Chimp (Feb. 2011 (CSAC 2.1.4/panTro4)), Chain and Net Alignments |
| Human Chain/Net |
| Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments |
| Bushbaby Chain/Net |
| Bushbaby (Mar. 2011 (Broad/otoGar3)), Chain and Net Alignments |
| Mouse lemur Chain/Net |
| Mouse lemur (May 2015 (Mouse lemur/micMur2)), Chain and Net Alignments |
| Tree shrew Chain/Net |
| Tree shrew (Dec. 2006 (Broad/tupBel1)), Chain and Net Alignments |
| mm10 ChainNet |
| Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments |
| Mouse Chain/Net |
| Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments |
| Dog Chain/Net |
| Dog (Sep. 2011 (Broad CanFam3.1/canFam3)), Chain and Net Alignments |
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| RepeatMasker |
| Repeating Elements by RepeatMasker |
| Interrupted Rpts |
| Fragments of Interrupted Repeats Joined by RepeatMasker ID |
| Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
| Simple Repeats |
| Simple Tandem Repeats by TRF |
| WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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