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Configure Tracks on UCSC Genome Browser: S. cerevisiae Apr. 2011 (SacCer_Apr2011/sacCer3)
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-   JASPAR TFBS    
JASPAR2020 TFBS sacCer3 TFBS predictions in Saccharomyces cerevisiae (sacCer3) for all profiles in the JASPAR CORE fungi collection (2020)
JASPAR2022 TFBS sacCer3 TFBS predictions in Saccharomyces cerevisiae (sacCer3) for all profiles in the JASPAR CORE fungi collection (2022)
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
WashU Clones Washington University Clones
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
NCBI RefSeq RefSeq genes from NCBI
SGD Genes Protein-Coding Genes from Saccharomyces Genome Database
SGD Other Other Features from Saccharomyces Genome Database
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
CRISPR CRISPR/Cas9 Sp. Pyog. target sites
     CRISPR Regions     Genome regions processed to find CRISPR/Cas9 target sites (exons +/- 200 bp)
     CRISPR Targets     CRISPR/Cas9 -NGG Targets
Ensembl Genes Ensembl Genes
Human Proteins Human Proteins Mapped by Chained tBLASTn
Other RefSeq Non-S. cerevisiae RefSeq Genes
UniProt UniProt SwissProt/TrEMBL Protein Annotations
-   mRNA and EST    
S. cer. ESTs S. cerevisiae ESTs Including Unspliced
S. cer. mRNAs S. cerevisiae mRNAs from GenBank
Spliced ESTs S. cerevisiae ESTs That Have Been Spliced
-   Expression and Regulation    
Regulatory Code Transcriptional Regulatory Code from Harbison Gordon et al.
Reg. ChIP-chip ChIP-chip Results from Harbison Gordon et al.
ORegAnno Regulatory elements from ORegAnno
Reg. Module Eran Segal Regulatory Module
-   Comparative Genomics    
Conservation Multiz Alignment & Conservation (7 Yeasts)
-   Variation and Repeats    
updated EVA SNP Short Genetic Variants from European Variant Archive
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF