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Display chromosome ideogram above main graphic
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Display labels to the left of items in tracks
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Configure Tracks on UCSC Genome Browser: Rhesus Nov. 2015 (BCM Mmul_8.0.1/rheMac8)
  Tracks:    Groups:
Control track and group visibility more selectively below.
-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
INSDC Accession at INSDC - International Nucleotide Sequence Database Collaboration
RefSeq Acc RefSeq Accession
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
NCBI RefSeq RefSeq genes from NCBI
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Ensembl Genes Ensembl Genes
Genscan Genes Genscan Gene Predictions
Other RefSeq Non-Rhesus RefSeq Genes
TransMap V5 TransMap Alignments Version 5
     TransMap Ensembl     TransMap Ensembl and GENCODE Mappings Version 5
     TransMap RefGene     TransMap RefSeq Gene Mappings Version 5
     TransMap RNA     TransMap GenBank RNA Mappings Version 5
     TransMap ESTs     TransMap EST Mappings Version 5
-   mRNA and EST    
Rhesus ESTs Rhesus ESTs Including Unspliced
Rhesus mRNAs Rhesus mRNAs from GenBank
Spliced ESTs Rhesus ESTs That Have Been Spliced
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
FANTOM5 FANTOM5
     TSS peaks     FANTOM5 DPI peak, robust set
     Total counts     Total counts of CAGE reads
     Max counts     Max counts of CAGE reads
     TSS activity(read counts)     TSS activity per sample(read counts)
     TSS activity(TPM)     TSS activity per sample(TPM)
-   Comparative Genomics    
Rat Chain/Net Rat (Jul. 2014 (RGSC 6.0/rn6)), Chain and Net Alignments
Green monkey Chain/Net Green monkey (Mar. 2014 (Chlorocebus_sabeus 1.1/chlSab2)), Chain and Net Alignments
Human Chain/Net Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments
Mouse Chain/Net Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
updated EVA SNP Short Genetic Variants from European Variant Archive
Interrupted Rpts Fragments of Interrupted Repeats Joined by RepeatMasker ID
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust