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Configure Tracks on UCSC Genome Browser: Hawaiian monk seal Jun. 2017 (ASM220157v1/neoSch1)
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-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
INSDC Accession at INSDC - International Nucleotide Sequence Database Collaboration
RefSeq Acc RefSeq Accession
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
NCBI RefSeq RefSeq genes from NCBI
TransMap V5 TransMap Alignments Version 5
     TransMap Ensembl     TransMap Ensembl and GENCODE Mappings Version 5
     TransMap RefGene     TransMap RefSeq Gene Mappings Version 5
     TransMap RNA     TransMap GenBank RNA Mappings Version 5
     TransMap ESTs     TransMap EST Mappings Version 5
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Genscan Genes Genscan Gene Predictions
Other RefSeq Non-Hawaiian monk seal RefSeq Genes
TOGA vs. hg38 TOGA annotations using human/hg38 as reference
UniProt UniProt SwissProt/TrEMBL Protein Annotations
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
-   Comparative Genomics    
Dog Chain/Net Dog (Mar. 2020 (UU_Cfam_GSD_1.0/canFam4)), Chain and Net Alignments
mm10 ChainNet Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments
Mouse Chain/Net Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments
Rhesus Chain/Net Rhesus (Feb. 2019 (Mmul_10/rheMac10)), Chain and Net Alignments
Chimp Chain/Net Chimp (Jan. 2018 (Clint_PTRv2/panTro6)), Chain and Net Alignments
Human Chain/Net Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments
Elephant Chain/Net Elephant (Jul. 2009 (Broad/loxAfr3)), Chain and Net Alignments
Opossum Chain/Net Opossum (Oct. 2006 (Broad/monDom5)), Chain and Net Alignments
Platypus Chain/Net Platypus (Feb. 2007 (ASM227v2/ornAna2)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
Interrupted Rpts Fragments of Interrupted Repeats Joined by RepeatMasker ID
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust