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Base Position |
| Chromosome position in bases. (Clicks here zoom in 3x) |
Assembly |
| Assembly from Fragments |
Gap |
| Gap Locations |
GC Percent |
| GC Percent in 5-Base Windows |
INSDC |
| Accession at INSDC - International Nucleotide Sequence Database Collaboration |
RefSeq Acc |
| RefSeq Accession |
Restr Enzymes |
| Restriction Enzymes from REBASE |
Short Match |
| Perfect Matches to Short Sequence () |
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NCBI RefSeq |
| RefSeq genes from NCBI |
AUGUSTUS |
| AUGUSTUS ab initio gene predictions v3.1 |
Ensembl Genes |
| Ensembl Genes |
Genscan Genes |
| Genscan Gene Predictions |
Other RefSeq |
| Non-Crab-eating macaque RefSeq Genes |
TransMap V5 |
| TransMap Alignments Version 5 |
TransMap Ensembl |
| TransMap Ensembl and GENCODE Mappings Version 5 |
TransMap RefGene |
| TransMap RefSeq Gene Mappings Version 5 |
TransMap RNA |
| TransMap GenBank RNA Mappings Version 5 |
TransMap ESTs |
| TransMap EST Mappings Version 5 |
UniProt |
| UniProt SwissProt/TrEMBL Protein Annotations |
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Crab-eating macaque ESTs |
| Crab-eating macaque ESTs Including Unspliced |
Crab-eating macaque mRNAs |
| Crab-eating macaque mRNAs from GenBank |
Spliced ESTs |
| Crab-eating macaque ESTs That Have Been Spliced |
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CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
CpG Islands |
| CpG Islands (Islands < 300 Bases are Light Green) |
Unmasked CpG |
| CpG Islands on All Sequence (Islands < 300 Bases are Light Green) |
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Baboon Chain/Net |
| Baboon (Nov. 2008 (Baylor Pham_1.0/papHam1)), Chain and Net Alignments |
Marmoset Chain/Net |
| Marmoset (May 2020 (Callithrix_jacchus_cj1700_1.1/calJac4)), Chain and Net Alignments |
Tarsier Chain/Net |
| Tarsier (Sep. 2013 (Tarsius_syrichta-2.0.1/tarSyr2)), Chain and Net Alignments |
hg19 Chain/Net |
| Human (Feb. 2009 (GRCh37/hg19)), Chain and Net Alignments |
Human Chain/Net |
| Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments |
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RepeatMasker |
| Repeating Elements by RepeatMasker |
updated
EVA SNP |
| Short Genetic Variants from European Variant Archive |
Microsatellite |
| Microsatellites - Di-nucleotide and Tri-nucleotide Repeats |
Simple Repeats |
| Simple Tandem Repeats by TRF |
WM + SDust |
| Genomic Intervals Masked by WindowMasker + SDust |
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