RIKEN CAGE Loc Track Settings
 
RNA Subcellular CAGE Localization from ENCODE/RIKEN

Maximum display mode:       Reset to defaults   
Select views (Help):
TSS HMM Clusters       Minus Signal ▾       Plus Signal ▾       Alignments ▾      
Select subtracks by localization and cell line:
 All Localization Whole Cell  Cytosol  Nucleus  Polysome  Nucleoplasm  Chromatin  Nucleolus 
Cell Line
GM12878 (Tier 1) 
H1-hESC (Tier 1) 
K562 (Tier 1) 
A549 (Tier 2) 
B cells CD20+ (Tier 2) 
HeLa-S3 (Tier 2) 
HepG2 (Tier 2) 
HUVEC (Tier 2) 
IMR90 (Tier 2) 
MCF-7 (Tier 2) 
Monocytes CD14+ (Tier 2) 
SK-N-SH (Tier 2) 
AG04450 
BJ 
CD34+ Mobilized 
HAoAF 
HAoEC 
HCH 
HFDPC 
HMEpC 
hMSC-AT 
hMSC-BM 
hMSC-UC 
HOB 
HPC-PL 
HPIEpC 
HSaVEC 
HVMF 
HWP 
NHDF 
NHEK 
NHEM.f M2 
NHEM M2 
Prostate 
SkMC 
SK-N-SH RA 
Cell Line
 All Localization Whole Cell  Cytosol  Nucleus  Polysome  Nucleoplasm  Chromatin  Nucleolus 
Select subtracks further by: (select multiple categories and items - help)
RNA Extract:
 Replicate:

List subtracks: only selected/visible    all    ()
  Cell Line↓1 Localization↓2 RNA Extract↓3 views↑4 Replicate↓5   Track Name↓6  
 
hide
 K562  Cytosol  PolyA-  TSS HMM Clusters  Pooled  K562 cytosol polyA- CAGE TSS HMM from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Cytosol  PolyA-  Plus Signal  1st  K562 cytosol polyA- CAGE Plus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Cytosol  PolyA-  Minus Signal  1st  K562 cytosol polyA- CAGE Minus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 K562  Cytosol  PolyA+  TSS HMM Clusters  Pooled  K562 cytosol polyA+ CAGE TSS HMM from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Cytosol  PolyA+  Plus Signal  1st  K562 cytosol polyA+ CAGE Plus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Cytosol  PolyA+  Minus Signal  1st  K562 cytosol polyA+ CAGE Minus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 K562  Nucleus  PolyA-  TSS HMM Clusters  Pooled  K562 nucleus polyA- CAGE TSS HMM from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Nucleus  PolyA-  Plus Signal  1st  K562 nucleus polyA- CAGE Plus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Nucleus  PolyA-  Minus Signal  1st  K562 nucleus polyA- CAGE Minus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 K562  Nucleus  PolyA+  TSS HMM Clusters  Pooled  K562 nucleus polyA+ CAGE TSS HMM from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Nucleus  PolyA+  Plus Signal  1st  K562 nucleus polyA+ CAGE Plus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Nucleus  PolyA+  Minus Signal  1st  K562 nucleus polyA+ CAGE Minus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 K562  Whole Cell  PolyA+  TSS HMM Clusters  Pooled  K562 whole cell polyA+ CAGE TSS HMM from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Whole Cell  PolyA+  Plus Signal  1st  K562 whole cell polyA+ CAGE Plus start sites Rep 1 from ENCODE/RIKEN   Schema 
 
hide
 Configure 		 K562  Whole Cell  PolyA+  Minus Signal  1st  K562 whole cell polyA+ CAGE Minus start sites Rep 1 from ENCODE/RIKEN   Schema