Human methylome studies SRP230793 Track Settings
 
Cord blood DNA methylome in newborns later diagnosed with autism spectrum disorder reflects early dysregulation of neurodevelopmental and X-linked genes [Cord Blood]

Track collection: Human methylome studies

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AMR       PMD       CpG methylation ▾       CpG reads ▾       HMR      
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experiment
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experiment
 All views AMR  PMD  CpG methylation  CpG reads  HMR 
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 Configure
 SRX7191590  CpG methylation  Cord Blood / SRX7191590 (CpG methylation)   Schema 
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 SRX7191590  HMR  Cord Blood / SRX7191590 (HMR)   Schema 
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 SRX7191591  CpG methylation  Cord Blood / SRX7191591 (CpG methylation)   Schema 
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 SRX7191591  HMR  Cord Blood / SRX7191591 (HMR)   Schema 
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 SRX7191592  CpG methylation  Cord Blood / SRX7191592 (CpG methylation)   Schema 
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 SRX7191592  HMR  Cord Blood / SRX7191592 (HMR)   Schema 
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 SRX7191593  CpG methylation  Cord Blood / SRX7191593 (CpG methylation)   Schema 
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 SRX7191593  HMR  Cord Blood / SRX7191593 (HMR)   Schema 
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 SRX7191594  CpG methylation  Cord Blood / SRX7191594 (CpG methylation)   Schema 
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 SRX7191594  HMR  Cord Blood / SRX7191594 (HMR)   Schema 
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 SRX7191595  CpG methylation  Cord Blood / SRX7191595 (CpG methylation)   Schema 
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 SRX7191595  HMR  Cord Blood / SRX7191595 (HMR)   Schema 
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 SRX7191596  CpG methylation  Cord Blood / SRX7191596 (CpG methylation)   Schema 
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 SRX7191596  HMR  Cord Blood / SRX7191596 (HMR)   Schema 
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 SRX7191597  HMR  Cord Blood / SRX7191597 (HMR)   Schema 
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 SRX7191597  CpG methylation  Cord Blood / SRX7191597 (CpG methylation)   Schema 
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 SRX7191598  CpG methylation  Cord Blood / SRX7191598 (CpG methylation)   Schema 
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 SRX7191598  HMR  Cord Blood / SRX7191598 (HMR)   Schema 
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 SRX7191599  CpG methylation  Cord Blood / SRX7191599 (CpG methylation)   Schema 
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 SRX7191599  HMR  Cord Blood / SRX7191599 (HMR)   Schema 
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 SRX7191600  CpG methylation  Cord Blood / SRX7191600 (CpG methylation)   Schema 
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 SRX7191600  HMR  Cord Blood / SRX7191600 (HMR)   Schema 
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 SRX7191601  CpG methylation  Cord Blood / SRX7191601 (CpG methylation)   Schema 
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 SRX7191601  HMR  Cord Blood / SRX7191601 (HMR)   Schema 
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 SRX7191602  CpG methylation  Cord Blood / SRX7191602 (CpG methylation)   Schema 
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 SRX7191602  HMR  Cord Blood / SRX7191602 (HMR)   Schema 
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 SRX7191603  CpG methylation  Cord Blood / SRX7191603 (CpG methylation)   Schema 
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 SRX7191603  HMR  Cord Blood / SRX7191603 (HMR)   Schema 
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 SRX7191604  CpG methylation  Cord Blood / SRX7191604 (CpG methylation)   Schema 
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 SRX7191604  HMR  Cord Blood / SRX7191604 (HMR)   Schema 
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 SRX7191605  CpG methylation  Cord Blood / SRX7191605 (CpG methylation)   Schema 
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 SRX7191605  HMR  Cord Blood / SRX7191605 (HMR)   Schema 
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 SRX7191606  CpG methylation  Cord Blood / SRX7191606 (CpG methylation)   Schema 
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 SRX7191606  HMR  Cord Blood / SRX7191606 (HMR)   Schema 
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 SRX7191607  CpG methylation  Cord Blood / SRX7191607 (CpG methylation)   Schema 
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 SRX7191607  HMR  Cord Blood / SRX7191607 (HMR)   Schema 
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 SRX7191608  CpG methylation  Cord Blood / SRX7191608 (CpG methylation)   Schema 
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 SRX7191608  HMR  Cord Blood / SRX7191608 (HMR)   Schema 
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 SRX7191609  CpG methylation  Cord Blood / SRX7191609 (CpG methylation)   Schema 
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 SRX7191609  HMR  Cord Blood / SRX7191609 (HMR)   Schema 
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 SRX7191610  CpG methylation  Cord Blood / SRX7191610 (CpG methylation)   Schema 
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 SRX7191610  HMR  Cord Blood / SRX7191610 (HMR)   Schema 
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 SRX7191611  CpG methylation  Cord Blood / SRX7191611 (CpG methylation)   Schema 
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 SRX7191611  HMR  Cord Blood / SRX7191611 (HMR)   Schema 
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 SRX7191612  CpG methylation  Cord Blood / SRX7191612 (CpG methylation)   Schema 
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 SRX7191612  HMR  Cord Blood / SRX7191612 (HMR)   Schema 
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 SRX7191613  CpG methylation  Cord Blood / SRX7191613 (CpG methylation)   Schema 
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 SRX7191613  HMR  Cord Blood / SRX7191613 (HMR)   Schema 
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 SRX7191614  CpG methylation  Cord Blood / SRX7191614 (CpG methylation)   Schema 
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 SRX7191614  HMR  Cord Blood / SRX7191614 (HMR)   Schema 
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 SRX7191615  CpG methylation  Cord Blood / SRX7191615 (CpG methylation)   Schema 
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 SRX7191615  HMR  Cord Blood / SRX7191615 (HMR)   Schema 
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 SRX7191616  HMR  Cord Blood / SRX7191616 (HMR)   Schema 
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 SRX7191616  CpG methylation  Cord Blood / SRX7191616 (CpG methylation)   Schema 
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 SRX7191617  CpG methylation  Cord Blood / SRX7191617 (CpG methylation)   Schema 
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 SRX7191617  HMR  Cord Blood / SRX7191617 (HMR)   Schema 
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 SRX7191618  CpG methylation  Cord Blood / SRX7191618 (CpG methylation)   Schema 
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 SRX7191618  HMR  Cord Blood / SRX7191618 (HMR)   Schema 
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 SRX7191619  CpG methylation  Cord Blood / SRX7191619 (CpG methylation)   Schema 
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 SRX7191619  HMR  Cord Blood / SRX7191619 (HMR)   Schema 
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 SRX7191620  CpG methylation  Cord Blood / SRX7191620 (CpG methylation)   Schema 
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 SRX7191620  HMR  Cord Blood / SRX7191620 (HMR)   Schema 
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 SRX7191621  CpG methylation  Cord Blood / SRX7191621 (CpG methylation)   Schema 
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 SRX7191621  HMR  Cord Blood / SRX7191621 (HMR)   Schema 
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 SRX7191622  CpG methylation  Cord Blood / SRX7191622 (CpG methylation)   Schema 
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 SRX7191622  HMR  Cord Blood / SRX7191622 (HMR)   Schema 
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 SRX7191623  CpG methylation  Cord Blood / SRX7191623 (CpG methylation)   Schema 
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 SRX7191623  HMR  Cord Blood / SRX7191623 (HMR)   Schema 
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 SRX7191624  CpG methylation  Cord Blood / SRX7191624 (CpG methylation)   Schema 
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 SRX7191624  HMR  Cord Blood / SRX7191624 (HMR)   Schema 
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 SRX7191625  CpG methylation  Cord Blood / SRX7191625 (CpG methylation)   Schema 
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 SRX7191625  HMR  Cord Blood / SRX7191625 (HMR)   Schema 
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 SRX7191626  CpG methylation  Cord Blood / SRX7191626 (CpG methylation)   Schema 
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 SRX7191626  HMR  Cord Blood / SRX7191626 (HMR)   Schema 
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 SRX7191627  CpG methylation  Cord Blood / SRX7191627 (CpG methylation)   Schema 
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 SRX7191627  HMR  Cord Blood / SRX7191627 (HMR)   Schema 
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 SRX7191628  CpG methylation  Cord Blood / SRX7191628 (CpG methylation)   Schema 
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 SRX7191628  HMR  Cord Blood / SRX7191628 (HMR)   Schema 
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 SRX7191629  CpG methylation  Cord Blood / SRX7191629 (CpG methylation)   Schema 
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 SRX7191629  HMR  Cord Blood / SRX7191629 (HMR)   Schema 
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 SRX7191630  CpG methylation  Cord Blood / SRX7191630 (CpG methylation)   Schema 
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 SRX7191630  HMR  Cord Blood / SRX7191630 (HMR)   Schema 
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 SRX7191631  CpG methylation  Cord Blood / SRX7191631 (CpG methylation)   Schema 
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 SRX7191631  HMR  Cord Blood / SRX7191631 (HMR)   Schema 
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 SRX7191632  HMR  Cord Blood / SRX7191632 (HMR)   Schema 
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 SRX7191632  CpG methylation  Cord Blood / SRX7191632 (CpG methylation)   Schema 
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 SRX7191633  CpG methylation  Cord Blood / SRX7191633 (CpG methylation)   Schema 
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 SRX7191633  HMR  Cord Blood / SRX7191633 (HMR)   Schema 
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 SRX7191634  CpG methylation  Cord Blood / SRX7191634 (CpG methylation)   Schema 
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 SRX7191634  HMR  Cord Blood / SRX7191634 (HMR)   Schema 
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 SRX7191635  HMR  Cord Blood / SRX7191635 (HMR)   Schema 
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 SRX7191635  CpG methylation  Cord Blood / SRX7191635 (CpG methylation)   Schema 
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 SRX7191636  CpG methylation  Cord Blood / SRX7191636 (CpG methylation)   Schema 
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 SRX7191636  HMR  Cord Blood / SRX7191636 (HMR)   Schema 
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 SRX7191637  CpG methylation  Cord Blood / SRX7191637 (CpG methylation)   Schema 
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 SRX7191637  HMR  Cord Blood / SRX7191637 (HMR)   Schema 
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 SRX7191638  CpG methylation  Cord Blood / SRX7191638 (CpG methylation)   Schema 
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 SRX7191638  HMR  Cord Blood / SRX7191638 (HMR)   Schema 
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 SRX7191639  CpG methylation  Cord Blood / SRX7191639 (CpG methylation)   Schema 
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 SRX7191639  HMR  Cord Blood / SRX7191639 (HMR)   Schema 
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 SRX7191640  CpG methylation  Cord Blood / SRX7191640 (CpG methylation)   Schema 
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 SRX7191640  HMR  Cord Blood / SRX7191640 (HMR)   Schema 
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 SRX7191641  CpG methylation  Cord Blood / SRX7191641 (CpG methylation)   Schema 
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 SRX7191641  HMR  Cord Blood / SRX7191641 (HMR)   Schema 
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 SRX7191642  CpG methylation  Cord Blood / SRX7191642 (CpG methylation)   Schema 
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 SRX7191642  HMR  Cord Blood / SRX7191642 (HMR)   Schema 
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 SRX7191643  CpG methylation  Cord Blood / SRX7191643 (CpG methylation)   Schema 
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 SRX7191643  HMR  Cord Blood / SRX7191643 (HMR)   Schema 
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 SRX7191644  CpG methylation  Cord Blood / SRX7191644 (CpG methylation)   Schema 
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 SRX7191644  HMR  Cord Blood / SRX7191644 (HMR)   Schema 
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 SRX7191645  CpG methylation  Cord Blood / SRX7191645 (CpG methylation)   Schema 
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 SRX7191645  HMR  Cord Blood / SRX7191645 (HMR)   Schema 
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 SRX7191646  CpG methylation  Cord Blood / SRX7191646 (CpG methylation)   Schema 
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 SRX7191646  HMR  Cord Blood / SRX7191646 (HMR)   Schema 
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 SRX7191647  CpG methylation  Cord Blood / SRX7191647 (CpG methylation)   Schema 
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 SRX7191647  HMR  Cord Blood / SRX7191647 (HMR)   Schema 
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 SRX7191648  CpG methylation  Cord Blood / SRX7191648 (CpG methylation)   Schema 
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 SRX7191648  HMR  Cord Blood / SRX7191648 (HMR)   Schema 
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 SRX7191649  CpG methylation  Cord Blood / SRX7191649 (CpG methylation)   Schema 
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 SRX7191649  HMR  Cord Blood / SRX7191649 (HMR)   Schema 
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 SRX7191650  CpG methylation  Cord Blood / SRX7191650 (CpG methylation)   Schema 
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 SRX7191650  HMR  Cord Blood / SRX7191650 (HMR)   Schema 
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 SRX7191651  HMR  Cord Blood / SRX7191651 (HMR)   Schema 
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 SRX7191651  CpG methylation  Cord Blood / SRX7191651 (CpG methylation)   Schema 
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 SRX7191652  CpG methylation  Cord Blood / SRX7191652 (CpG methylation)   Schema 
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 SRX7191652  HMR  Cord Blood / SRX7191652 (HMR)   Schema 
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 SRX7191653  CpG methylation  Cord Blood / SRX7191653 (CpG methylation)   Schema 
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 SRX7191653  HMR  Cord Blood / SRX7191653 (HMR)   Schema 
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 SRX7191654  HMR  Cord Blood / SRX7191654 (HMR)   Schema 
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 SRX7191654  CpG methylation  Cord Blood / SRX7191654 (CpG methylation)   Schema 
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 SRX7191655  CpG methylation  Cord Blood / SRX7191655 (CpG methylation)   Schema 
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 SRX7191655  HMR  Cord Blood / SRX7191655 (HMR)   Schema 
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 SRX7191656  CpG methylation  Cord Blood / SRX7191656 (CpG methylation)   Schema 
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 SRX7191656  HMR  Cord Blood / SRX7191656 (HMR)   Schema 
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 SRX7191657  CpG methylation  Cord Blood / SRX7191657 (CpG methylation)   Schema 
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 SRX7191657  HMR  Cord Blood / SRX7191657 (HMR)   Schema 
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 SRX7191658  CpG methylation  Cord Blood / SRX7191658 (CpG methylation)   Schema 
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 SRX7191658  HMR  Cord Blood / SRX7191658 (HMR)   Schema 
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 SRX7191659  CpG methylation  Cord Blood / SRX7191659 (CpG methylation)   Schema 
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 SRX7191659  HMR  Cord Blood / SRX7191659 (HMR)   Schema 
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 SRX7191660  CpG methylation  Cord Blood / SRX7191660 (CpG methylation)   Schema 
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 SRX7191660  HMR  Cord Blood / SRX7191660 (HMR)   Schema 
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 SRX7191661  CpG methylation  Cord Blood / SRX7191661 (CpG methylation)   Schema 
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 SRX7191661  HMR  Cord Blood / SRX7191661 (HMR)   Schema 
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 SRX7191662  CpG methylation  Cord Blood / SRX7191662 (CpG methylation)   Schema 
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 SRX7191662  HMR  Cord Blood / SRX7191662 (HMR)   Schema 
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 SRX7191663  CpG methylation  Cord Blood / SRX7191663 (CpG methylation)   Schema 
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 SRX7191663  HMR  Cord Blood / SRX7191663 (HMR)   Schema 
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 SRX7191664  CpG methylation  Cord Blood / SRX7191664 (CpG methylation)   Schema 
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 SRX7191664  HMR  Cord Blood / SRX7191664 (HMR)   Schema 
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 SRX7191665  CpG methylation  Cord Blood / SRX7191665 (CpG methylation)   Schema 
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 SRX7191665  HMR  Cord Blood / SRX7191665 (HMR)   Schema 
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 SRX7191666  CpG methylation  Cord Blood / SRX7191666 (CpG methylation)   Schema 
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 SRX7191666  HMR  Cord Blood / SRX7191666 (HMR)   Schema 
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 SRX7191667  CpG methylation  Cord Blood / SRX7191667 (CpG methylation)   Schema 
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 SRX7191667  HMR  Cord Blood / SRX7191667 (HMR)   Schema 
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 SRX7191668  CpG methylation  Cord Blood / SRX7191668 (CpG methylation)   Schema 
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 SRX7191668  HMR  Cord Blood / SRX7191668 (HMR)   Schema 
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 SRX7191669  CpG methylation  Cord Blood / SRX7191669 (CpG methylation)   Schema 
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 SRX7191669  HMR  Cord Blood / SRX7191669 (HMR)   Schema 
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 SRX7191670  HMR  Cord Blood / SRX7191670 (HMR)   Schema 
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 SRX7191670  CpG methylation  Cord Blood / SRX7191670 (CpG methylation)   Schema 
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 SRX7191671  CpG methylation  Cord Blood / SRX7191671 (CpG methylation)   Schema 
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 SRX7191671  HMR  Cord Blood / SRX7191671 (HMR)   Schema 
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 SRX7191672  CpG methylation  Cord Blood / SRX7191672 (CpG methylation)   Schema 
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 SRX7191672  HMR  Cord Blood / SRX7191672 (HMR)   Schema 
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 SRX7191673  HMR  Cord Blood / SRX7191673 (HMR)   Schema 
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 SRX7191673  CpG methylation  Cord Blood / SRX7191673 (CpG methylation)   Schema 
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 SRX7191674  CpG methylation  Cord Blood / SRX7191674 (CpG methylation)   Schema 
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 SRX7191674  HMR  Cord Blood / SRX7191674 (HMR)   Schema 
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 SRX7191675  CpG methylation  Cord Blood / SRX7191675 (CpG methylation)   Schema 
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 SRX7191675  HMR  Cord Blood / SRX7191675 (HMR)   Schema 
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 SRX7191676  CpG methylation  Cord Blood / SRX7191676 (CpG methylation)   Schema 
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 SRX7191676  HMR  Cord Blood / SRX7191676 (HMR)   Schema 
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 SRX7191677  CpG methylation  Cord Blood / SRX7191677 (CpG methylation)   Schema 
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 SRX7191677  HMR  Cord Blood / SRX7191677 (HMR)   Schema 
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 SRX7191678  CpG methylation  Cord Blood / SRX7191678 (CpG methylation)   Schema 
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 SRX7191678  HMR  Cord Blood / SRX7191678 (HMR)   Schema 
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 SRX7191679  CpG methylation  Cord Blood / SRX7191679 (CpG methylation)   Schema 
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 SRX7191679  HMR  Cord Blood / SRX7191679 (HMR)   Schema 
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 SRX7191680  CpG methylation  Cord Blood / SRX7191680 (CpG methylation)   Schema 
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 SRX7191680  HMR  Cord Blood / SRX7191680 (HMR)   Schema 
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 SRX7191681  CpG methylation  Cord Blood / SRX7191681 (CpG methylation)   Schema 
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 SRX7191681  HMR  Cord Blood / SRX7191681 (HMR)   Schema 
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 SRX7191682  CpG methylation  Cord Blood / SRX7191682 (CpG methylation)   Schema 
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 SRX7191682  HMR  Cord Blood / SRX7191682 (HMR)   Schema 
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 SRX7191683  CpG methylation  Cord Blood / SRX7191683 (CpG methylation)   Schema 
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 SRX7191683  HMR  Cord Blood / SRX7191683 (HMR)   Schema 
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 SRX7191684  CpG methylation  Cord Blood / SRX7191684 (CpG methylation)   Schema 
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 SRX7191684  HMR  Cord Blood / SRX7191684 (HMR)   Schema 
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 SRX7191685  CpG methylation  Cord Blood / SRX7191685 (CpG methylation)   Schema 
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 SRX7191685  HMR  Cord Blood / SRX7191685 (HMR)   Schema 
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 SRX7191686  CpG methylation  Cord Blood / SRX7191686 (CpG methylation)   Schema 
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 SRX7191686  HMR  Cord Blood / SRX7191686 (HMR)   Schema 
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 SRX7191687  CpG methylation  Cord Blood / SRX7191687 (CpG methylation)   Schema 
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 SRX7191687  HMR  Cord Blood / SRX7191687 (HMR)   Schema 
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 SRX7191688  CpG methylation  Cord Blood / SRX7191688 (CpG methylation)   Schema 
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 SRX7191688  HMR  Cord Blood / SRX7191688 (HMR)   Schema 
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 SRX7191689  HMR  Cord Blood / SRX7191689 (HMR)   Schema 
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 SRX7191689  CpG methylation  Cord Blood / SRX7191689 (CpG methylation)   Schema 
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 SRX7191690  CpG methylation  Cord Blood / SRX7191690 (CpG methylation)   Schema 
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 SRX7191690  HMR  Cord Blood / SRX7191690 (HMR)   Schema 
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 SRX7191691  CpG methylation  Cord Blood / SRX7191691 (CpG methylation)   Schema 
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 SRX7191691  HMR  Cord Blood / SRX7191691 (HMR)   Schema 
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 SRX7191692  HMR  Cord Blood / SRX7191692 (HMR)   Schema 
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 SRX7191692  CpG methylation  Cord Blood / SRX7191692 (CpG methylation)   Schema 
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 SRX7191693  CpG methylation  Cord Blood / SRX7191693 (CpG methylation)   Schema 
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 SRX7191693  HMR  Cord Blood / SRX7191693 (HMR)   Schema 
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 SRX7191694  CpG methylation  Cord Blood / SRX7191694 (CpG methylation)   Schema 
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 SRX7191694  HMR  Cord Blood / SRX7191694 (HMR)   Schema 
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 SRX7191695  CpG methylation  Cord Blood / SRX7191695 (CpG methylation)   Schema 
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 SRX7191695  HMR  Cord Blood / SRX7191695 (HMR)   Schema 
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 SRX7191696  CpG methylation  Cord Blood / SRX7191696 (CpG methylation)   Schema 
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 SRX7191696  HMR  Cord Blood / SRX7191696 (HMR)   Schema 
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 SRX7191697  CpG methylation  Cord Blood / SRX7191697 (CpG methylation)   Schema 
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 SRX7191697  HMR  Cord Blood / SRX7191697 (HMR)   Schema 
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 SRX7191698  CpG methylation  Cord Blood / SRX7191698 (CpG methylation)   Schema 
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 SRX7191698  HMR  Cord Blood / SRX7191698 (HMR)   Schema 
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 SRX7191699  CpG methylation  Cord Blood / SRX7191699 (CpG methylation)   Schema 
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 SRX7191699  HMR  Cord Blood / SRX7191699 (HMR)   Schema 
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 SRX7191700  CpG methylation  Cord Blood / SRX7191700 (CpG methylation)   Schema 
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 SRX7191700  HMR  Cord Blood / SRX7191700 (HMR)   Schema 
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 SRX7191701  CpG methylation  Cord Blood / SRX7191701 (CpG methylation)   Schema 
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 SRX7191701  HMR  Cord Blood / SRX7191701 (HMR)   Schema 
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 SRX7191702  CpG methylation  Cord Blood / SRX7191702 (CpG methylation)   Schema 
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 SRX7191702  HMR  Cord Blood / SRX7191702 (HMR)   Schema 
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 SRX7191703  CpG methylation  Cord Blood / SRX7191703 (CpG methylation)   Schema 
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 SRX7191703  HMR  Cord Blood / SRX7191703 (HMR)   Schema 
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 SRX7191704  CpG methylation  Cord Blood / SRX7191704 (CpG methylation)   Schema 
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 SRX7191704  HMR  Cord Blood / SRX7191704 (HMR)   Schema 
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 SRX7191706  CpG methylation  Cord Blood / SRX7191706 (CpG methylation)   Schema 
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 SRX7191706  HMR  Cord Blood / SRX7191706 (HMR)   Schema 
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 SRX7191707  CpG methylation  Cord Blood / SRX7191707 (CpG methylation)   Schema 
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 SRX7191707  HMR  Cord Blood / SRX7191707 (HMR)   Schema 
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 SRX7191708  CpG methylation  Cord Blood / SRX7191708 (CpG methylation)   Schema 
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 SRX7191708  HMR  Cord Blood / SRX7191708 (HMR)   Schema 
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 SRX7191709  HMR  Cord Blood / SRX7191709 (HMR)   Schema 
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 SRX7191709  CpG methylation  Cord Blood / SRX7191709 (CpG methylation)   Schema 
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 SRX7191710  CpG methylation  Cord Blood / SRX7191710 (CpG methylation)   Schema 
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 SRX7191710  HMR  Cord Blood / SRX7191710 (HMR)   Schema 
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 SRX7191711  CpG methylation  Cord Blood / SRX7191711 (CpG methylation)   Schema 
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 SRX7191711  HMR  Cord Blood / SRX7191711 (HMR)   Schema 
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 SRX7191712  HMR  Cord Blood / SRX7191712 (HMR)   Schema 
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 SRX7191712  CpG methylation  Cord Blood / SRX7191712 (CpG methylation)   Schema 
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 SRX7191713  CpG methylation  Cord Blood / SRX7191713 (CpG methylation)   Schema 
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 SRX7191713  HMR  Cord Blood / SRX7191713 (HMR)   Schema 
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 SRX7191714  CpG methylation  Cord Blood / SRX7191714 (CpG methylation)   Schema 
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 SRX7191714  HMR  Cord Blood / SRX7191714 (HMR)   Schema 
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 SRX7191715  CpG methylation  Cord Blood / SRX7191715 (CpG methylation)   Schema 
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 SRX7191715  HMR  Cord Blood / SRX7191715 (HMR)   Schema 
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 SRX7191716  CpG methylation  Cord Blood / SRX7191716 (CpG methylation)   Schema 
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 SRX7191716  HMR  Cord Blood / SRX7191716 (HMR)   Schema 
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 SRX7191717  CpG methylation  Cord Blood / SRX7191717 (CpG methylation)   Schema 
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 SRX7191717  HMR  Cord Blood / SRX7191717 (HMR)   Schema 
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 SRX7191718  CpG methylation  Cord Blood / SRX7191718 (CpG methylation)   Schema 
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 SRX7191718  HMR  Cord Blood / SRX7191718 (HMR)   Schema 
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 SRX7191719  CpG methylation  Cord Blood / SRX7191719 (CpG methylation)   Schema 
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 SRX7191719  HMR  Cord Blood / SRX7191719 (HMR)   Schema 
    

Study title: Cord blood DNA methylome in newborns later diagnosed with autism spectrum disorder reflects early dysregulation of neurodevelopmental and X-linked genes
SRA: SRP230793
GEO: GSE140730
Pubmed: 33054850

Experiment Label Methylation Coverage HMRs HMR size AMRs AMR size PMDs PMD size Conversion Details
SRX7191590 Cord Blood 0.776 8.9 45886 1057.6 691 897.8 1343 22086.5 0.981 title: GSM4182609 Discovery_TD_M_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191591 Cord Blood 0.776 9.8 46218 1051.4 739 859.8 1309 23040.4 0.980 title: GSM4182610 Discovery_TD_M_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191592 Cord Blood 0.769 10.5 47818 1026.4 668 917.5 1360 20703.4 0.981 title: GSM4182611 Discovery_TD_M_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191593 Cord Blood 0.763 10.2 48148 1045.3 628 903.9 1285 23831.5 0.980 title: GSM4182612 Discovery_TD_M_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191594 Cord Blood 0.759 9.8 47676 1044.5 668 895.0 1523 21221.3 0.982 title: GSM4182613 Discovery_TD_M_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191595 Cord Blood 0.771 9.3 47195 1050.5 599 889.6 1357 19818.8 0.980 title: GSM4182614 Discovery_TD_M_06, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191596 Cord Blood 0.780 8.3 49247 1054.5 432 910.4 1389 21106.3 0.980 title: GSM4182615 Discovery_TD_M_07, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191597 Cord Blood 0.780 9.6 46851 1043.1 721 889.1 1298 20892.2 0.979 title: GSM4182616 Discovery_TD_M_08, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191598 Cord Blood 0.776 8.5 47006 1062.1 518 917.0 1469 21513.2 0.981 title: GSM4182617 Discovery_TD_M_09, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191599 Cord Blood 0.775 9.7 48786 1033.1 695 887.5 1522 22029.2 0.981 title: GSM4182618 Discovery_TD_M_10, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191600 Cord Blood 0.770 9.7 46554 1047.4 698 888.9 1396 20907.6 0.980 title: GSM4182619 Discovery_TD_M_11, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191601 Cord Blood 0.765 8.7 45637 1070.0 553 911.6 1339 19804.7 0.981 title: GSM4182620 Discovery_TD_M_12, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191602 Cord Blood 0.772 8.4 46853 1064.4 557 884.5 1126 27884.5 0.981 title: GSM4182621 Discovery_TD_M_13, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191603 Cord Blood 0.767 9.0 52430 1014.9 471 965.0 1206 31500.2 0.980 title: GSM4182622 Discovery_TD_M_14, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191604 Cord Blood 0.774 9.3 47705 1050.7 599 913.3 1487 20100.0 0.979 title: GSM4182623 Discovery_TD_M_15, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191605 Cord Blood 0.766 9.6 47482 1050.9 719 856.6 1477 22808.6 0.980 title: GSM4182624 Discovery_TD_M_16, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191606 Cord Blood 0.774 9.7 47282 1043.5 759 901.3 1449 22183.2 0.979 title: GSM4182625 Discovery_TD_M_17, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191607 Cord Blood 0.775 8.7 46747 1058.6 639 895.0 1558 22868.5 0.982 title: GSM4182626 Discovery_TD_M_18, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191608 Cord Blood 0.770 9.1 45274 1066.2 619 876.6 1402 21013.3 0.981 title: GSM4182627 Discovery_TD_M_19, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191609 Cord Blood 0.772 9.7 47318 1039.9 797 892.8 1403 23507.1 0.980 title: GSM4182628 Discovery_TD_M_20, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191610 Cord Blood 0.762 9.5 48098 1046.2 482 913.4 1222 22371.9 0.979 title: GSM4182629 Discovery_TD_M_21, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191611 Cord Blood 0.769 7.8 44861 1090.2 515 913.1 1016 26855.8 0.978 title: GSM4182630 Discovery_TD_M_22, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191612 Cord Blood 0.776 9.6 47732 1033.0 684 900.1 1459 20038.6 0.981 title: GSM4182631 Discovery_TD_M_23, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191613 Cord Blood 0.770 8.6 48868 1048.4 447 935.6 1374 22575.2 0.982 title: GSM4182632 Discovery_TD_M_24, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191614 Cord Blood 0.764 8.2 45078 1076.8 569 906.6 1031 27297.3 0.979 title: GSM4182633 Discovery_TD_M_25, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "EARLI"}
SRX7191615 Cord Blood 0.770 7.4 47734 1076.6 407 919.5 993 31144.8 0.983 title: GSM4182634 Discovery_TD_M_26, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191616 Cord Blood 0.771 7.2 43876 1103.6 516 935.4 1210 27770.4 0.983 title: GSM4182635 Discovery_TD_M_27, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191617 Cord Blood 0.769 4.7 40372 1216.0 219 937.5 754 36883.4 0.981 title: GSM4182636 Discovery_TD_M_28, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191618 Cord Blood 0.775 5.8 41431 1180.1 304 931.9 959 36952.0 0.972 title: GSM4182637 Discovery_TD_M_29, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191619 Cord Blood 0.770 5.2 40375 1197.6 215 1033.2 836 34867.8 0.969 title: GSM4182638 Discovery_TD_M_30, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191620 Cord Blood 0.760 4.6 39153 1234.5 239 961.1 764 36765.6 0.963 title: GSM4182639 Discovery_TD_M_31, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191621 Cord Blood 0.741 3.5 34905 1307.5 171 1048.6 367 36090.3 0.953 title: GSM4182640 Discovery_TD_M_32, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191622 Cord Blood 0.773 7.6 45153 1079.0 493 907.8 1054 30635.4 0.986 title: GSM4182641 Discovery_TD_M_33, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191623 Cord Blood 0.759 6.9 40564 1136.4 351 969.8 1059 22727.7 0.985 title: GSM4182642 Discovery_TD_M_34, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191624 Cord Blood 0.764 5.3 37811 1227.8 242 955.4 865 26889.2 0.982 title: GSM4182643 Discovery_TD_M_35, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191625 Cord Blood 0.772 10.5 47359 1037.1 1158 963.9 1440 23004.1 0.980 title: GSM4182644 Discovery_TD_F_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "EARLI"}
SRX7191626 Cord Blood 0.767 9.6 45594 1045.2 1037 980.1 1326 21149.3 0.979 title: GSM4182645 Discovery_TD_F_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "EARLI"}
SRX7191627 Cord Blood 0.772 9.7 47173 1039.3 1095 997.0 1576 20489.7 0.980 title: GSM4182646 Discovery_TD_F_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "EARLI"}
SRX7191628 Cord Blood 0.761 10.1 44596 1039.1 989 1020.5 1118 21507.2 0.980 title: GSM4182647 Discovery_TD_F_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "EARLI"}
SRX7191629 Cord Blood 0.732 9.0 43555 1077.9 793 988.1 918 25924.9 0.979 title: GSM4182648 Discovery_TD_F_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "EARLI"}
SRX7191630 Cord Blood 0.778 9.8 46780 1031.5 1159 973.8 1474 21347.5 0.979 title: GSM4182649 Discovery_TD_F_06, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "EARLI"}
SRX7191631 Cord Blood 0.777 8.5 46878 1039.0 981 992.6 1202 20737.0 0.983 title: GSM4182650 Discovery_TD_F_07, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191632 Cord Blood 0.772 8.5 44862 1070.7 915 964.6 1085 30708.7 0.982 title: GSM4182651 Discovery_TD_F_08, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191633 Cord Blood 0.767 8.3 47444 1052.5 878 960.2 1386 21295.8 0.981 title: GSM4182652 Discovery_TD_F_09, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191634 Cord Blood 0.767 6.3 41019 1159.6 486 984.1 989 33898.1 0.979 title: GSM4182653 Discovery_TD_F_10, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191635 Cord Blood 0.764 4.2 38002 1244.4 280 1060.9 582 35287.8 0.958 title: GSM4182654 Discovery_TD_F_11, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191636 Cord Blood 0.769 6.6 41590 1121.8 595 1029.3 1056 26063.4 0.985 title: GSM4182655 Discovery_TD_F_12, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191637 Cord Blood 0.763 6.9 43276 1101.6 702 1006.3 849 27742.6 0.986 title: GSM4182656 Discovery_TD_F_13, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191638 Cord Blood 0.760 5.7 46580 1153.7 461 1091.4 802 29657.0 0.983 title: GSM4182657 Discovery_TD_F_14, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191639 Cord Blood 0.757 3.3 35192 1289.5 215 947.2 532 48087.0 0.968 title: GSM4182658 Discovery_TD_F_15, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191640 Cord Blood 0.764 9.0 46002 1061.6 665 914.9 1434 20441.6 0.980 title: GSM4182659 Discovery_ASD_M_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191641 Cord Blood 0.741 8.0 42699 1110.3 465 930.6 968 22327.6 0.980 title: GSM4182660 Discovery_ASD_M_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191642 Cord Blood 0.765 9.6 45838 1041.9 599 915.9 1406 18773.2 0.980 title: GSM4182661 Discovery_ASD_M_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191643 Cord Blood 0.767 9.5 44332 1073.6 643 916.8 1337 25236.9 0.980 title: GSM4182662 Discovery_ASD_M_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191644 Cord Blood 0.756 10.4 47566 1033.5 653 909.0 1399 19047.1 0.980 title: GSM4182663 Discovery_ASD_M_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191645 Cord Blood 0.768 10.2 48596 1031.9 716 891.7 1549 21640.5 0.980 title: GSM4182664 Discovery_ASD_M_06, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191646 Cord Blood 0.774 10.4 52409 1000.0 562 928.4 1381 26808.0 0.979 title: GSM4182665 Discovery_ASD_M_07, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191647 Cord Blood 0.766 8.9 48628 1043.4 513 893.0 986 32754.2 0.979 title: GSM4182666 Discovery_ASD_M_08, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191648 Cord Blood 0.776 9.2 46016 1061.1 674 900.1 1455 19786.4 0.980 title: GSM4182667 Discovery_ASD_M_09, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191649 Cord Blood 0.760 8.5 46298 1074.3 543 903.1 1252 21997.7 0.978 title: GSM4182668 Discovery_ASD_M_10, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191650 Cord Blood 0.763 10.0 47665 1037.3 674 884.4 1185 19693.8 0.979 title: GSM4182669 Discovery_ASD_M_11, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191651 Cord Blood 0.768 9.1 50186 1033.9 514 932.0 1452 20532.1 0.980 title: GSM4182670 Discovery_ASD_M_12, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191652 Cord Blood 0.737 10.1 42858 1076.3 509 934.9 1100 17342.8 0.981 title: GSM4182671 Discovery_ASD_M_13, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191653 Cord Blood 0.770 11.0 50278 1014.4 687 879.9 1335 22896.2 0.982 title: GSM4182672 Discovery_ASD_M_14, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191654 Cord Blood 0.773 8.5 47690 1052.6 541 895.9 1270 21953.1 0.976 title: GSM4182673 Discovery_ASD_M_15, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191655 Cord Blood 0.753 8.6 42193 1106.0 496 886.7 1245 19451.0 0.974 title: GSM4182674 Discovery_ASD_M_16, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191656 Cord Blood 0.764 9.1 46240 1067.1 645 872.8 1493 24790.0 0.979 title: GSM4182675 Discovery_ASD_M_17, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191657 Cord Blood 0.768 9.5 48560 1039.3 536 914.0 1342 24533.7 0.982 title: GSM4182676 Discovery_ASD_M_18, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191658 Cord Blood 0.761 9.4 44700 1060.5 560 893.1 1329 18674.7 0.981 title: GSM4182677 Discovery_ASD_M_19, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191659 Cord Blood 0.771 8.6 47231 1050.5 557 896.0 1511 20620.3 0.977 title: GSM4182678 Discovery_ASD_M_20, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191660 Cord Blood 0.766 8.5 47713 1061.7 427 949.6 1396 20059.8 0.977 title: GSM4182679 Discovery_ASD_M_21, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191661 Cord Blood 0.767 9.9 44811 1069.3 762 885.9 1389 22864.2 0.976 title: GSM4182680 Discovery_ASD_M_22, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191662 Cord Blood 0.773 9.7 49984 1020.8 562 884.0 1259 20757.8 0.982 title: GSM4182681 Discovery_ASD_M_23, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191663 Cord Blood 0.776 10.0 48855 1039.1 696 892.0 1347 24150.0 0.981 title: GSM4182682 Discovery_ASD_M_24, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "EARLI"}
SRX7191664 Cord Blood 0.768 8.5 50844 1029.8 411 924.8 1158 30767.3 0.983 title: GSM4182683 Discovery_ASD_M_25, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191665 Cord Blood 0.764 8.2 46028 1079.5 477 896.3 1059 25490.0 0.984 title: GSM4182684 Discovery_ASD_M_26, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191666 Cord Blood 0.760 6.9 42155 1128.6 379 939.5 978 25808.4 0.978 title: GSM4182685 Discovery_ASD_M_27, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191667 Cord Blood 0.764 6.3 41756 1152.0 401 924.3 916 32957.0 0.971 title: GSM4182686 Discovery_ASD_M_28, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191668 Cord Blood 0.774 5.9 41192 1164.0 352 931.3 1006 34055.4 0.985 title: GSM4182687 Discovery_ASD_M_29, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191669 Cord Blood 0.773 9.6 48860 1028.5 637 924.8 1292 23183.9 0.986 title: GSM4182688 Discovery_ASD_M_30, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191670 Cord Blood 0.771 6.5 42003 1122.1 425 916.0 954 25547.5 0.985 title: GSM4182689 Discovery_ASD_M_31, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191671 Cord Blood 0.771 7.7 47645 1052.1 547 941.5 1095 25361.4 0.985 title: GSM4182690 Discovery_ASD_M_32, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191672 Cord Blood 0.765 8.0 46251 1073.8 567 922.5 906 26359.6 0.982 title: GSM4182691 Discovery_ASD_M_33, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191673 Cord Blood 0.766 8.9 46776 1055.2 901 992.7 1417 22170.7 0.980 title: GSM4182692 Discovery_ASD_F_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "EARLI"}
SRX7191674 Cord Blood 0.773 10.5 49016 1022.4 1088 971.8 1342 25411.4 0.980 title: GSM4182693 Discovery_ASD_F_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "EARLI"}
SRX7191675 Cord Blood 0.780 10.4 48025 1028.9 1097 969.9 1476 21042.5 0.980 title: GSM4182694 Discovery_ASD_F_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "EARLI"}
SRX7191676 Cord Blood 0.766 9.9 49944 1020.9 885 1020.1 1520 21743.6 0.978 title: GSM4182695 Discovery_ASD_F_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "EARLI"}
SRX7191677 Cord Blood 0.776 8.7 48609 1048.5 849 997.9 1478 26872.6 0.980 title: GSM4182696 Discovery_ASD_F_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "EARLI"}
SRX7191678 Cord Blood 0.740 10.3 46678 1033.4 964 982.8 1129 24208.1 0.980 title: GSM4182697 Discovery_ASD_F_06, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "EARLI"}
SRX7191679 Cord Blood 0.756 6.8 41483 1124.9 713 1028.1 915 23549.3 0.983 title: GSM4182698 Discovery_ASD_F_07, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191680 Cord Blood 0.772 7.5 46742 1072.3 684 1030.8 1182 29478.8 0.982 title: GSM4182699 Discovery_ASD_F_08, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191681 Cord Blood 0.768 8.5 46549 1053.8 821 958.6 1380 22726.0 0.982 title: GSM4182700 Discovery_ASD_F_09, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191682 Cord Blood 0.768 5.1 40045 1189.9 416 1040.6 641 34811.6 0.965 title: GSM4182701 Discovery_ASD_F_10, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191683 Cord Blood 0.766 4.4 37408 1221.5 362 1045.1 739 38846.6 0.953 title: GSM4182702 Discovery_ASD_F_11, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191684 Cord Blood 0.740 4.6 38794 1219.5 392 1047.8 700 34001.9 0.973 title: GSM4182703 Discovery_ASD_F_12, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191685 Cord Blood 0.771 7.4 46982 1064.8 684 1012.2 1077 26230.4 0.985 title: GSM4182704 Discovery_ASD_F_13, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191686 Cord Blood 0.768 6.7 43452 1105.4 777 964.0 940 32368.5 0.985 title: GSM4182705 Discovery_ASD_F_14, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191687 Cord Blood 0.771 8.3 44179 1080.6 730 999.8 1046 24986.8 0.984 title: GSM4182706 Discovery_ASD_F_15, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Discovery", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191688 Cord Blood 0.761 3.5 37756 1243.4 96 1092.8 485 38596.7 0.981 title: GSM4182707 Replication_TD_M_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191689 Cord Blood 0.766 2.8 35113 1345.1 40 1121.9 481 50231.3 0.978 title: GSM4182708 Replication_TD_M_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191690 Cord Blood 0.781 3.5 36329 1254.0 75 1192.8 572 37528.8 0.988 title: GSM4182709 Replication_TD_M_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191691 Cord Blood 0.776 3.7 36437 1243.6 77 963.0 400 41011.9 0.986 title: GSM4182710 Replication_TD_M_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191692 Cord Blood 0.770 3.1 35632 1262.1 81 1096.5 451 40458.1 0.987 title: GSM4182711 Replication_TD_M_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191693 Cord Blood 0.769 6.4 43675 1094.5 212 997.0 1022 24996.4 0.978 title: GSM4182712 Replication_TD_M_06, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191694 Cord Blood 0.768 4.8 37949 1192.4 152 1031.9 818 33479.7 0.983 title: GSM4182713 Replication_TD_M_07, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191695 Cord Blood 0.761 6.2 41984 1133.4 194 1000.6 1069 21479.7 0.980 title: GSM4182714 Replication_TD_M_08, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191696 Cord Blood 0.766 4.8 39166 1187.0 132 978.4 885 26125.4 0.984 title: GSM4182715 Replication_TD_M_09, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191697 Cord Blood 0.759 4.0 36398 1253.7 128 1095.1 681 34178.8 0.983 title: GSM4182716 Replication_TD_M_10, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191698 Cord Blood 0.764 6.2 42896 1109.8 221 1018.7 874 26647.8 0.981 title: GSM4182717 Replication_TD_M_11, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "male", "study": "MARBLES"}
SRX7191699 Cord Blood 0.768 6.3 45049 1076.3 368 1031.0 1110 27654.3 0.980 title: GSM4182718 Replication_TD_F_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "TD", "sex": "female", "study": "MARBLES"}
SRX7191700 Cord Blood 0.758 3.4 35149 1282.9 70 1050.8 544 35083.9 0.983 title: GSM4182719 Replication_ASD_M_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191701 Cord Blood 0.754 3.0 34514 1286.2 82 1053.6 329 41679.2 0.980 title: GSM4182720 Replication_ASD_M_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191702 Cord Blood 0.749 3.9 35891 1244.3 109 1059.7 440 31722.0 0.988 title: GSM4182721 Replication_ASD_M_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191703 Cord Blood 0.775 3.4 37132 1242.4 78 1060.3 484 45687.4 0.988 title: GSM4182722 Replication_ASD_M_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191704 Cord Blood 0.761 3.3 36007 1286.2 80 972.1 442 45880.6 0.988 title: GSM4182723 Replication_ASD_M_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191706 Cord Blood 0.771 5.7 41499 1147.3 166 1055.3 975 25275.7 0.980 title: GSM4182725 Replication_ASD_M_07, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191707 Cord Blood 0.762 5.0 39331 1184.4 165 1002.8 882 25099.4 0.978 title: GSM4182726 Replication_ASD_M_08, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191708 Cord Blood 0.766 4.7 38527 1194.1 151 1002.0 560 32073.9 0.982 title: GSM4182727 Replication_ASD_M_09, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191709 Cord Blood 0.768 5.3 39595 1171.5 157 1047.2 927 25817.7 0.981 title: GSM4182728 Replication_ASD_M_10, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191710 Cord Blood 0.749 6.3 39626 1159.1 214 998.2 865 24264.8 0.978 title: GSM4182729 Replication_ASD_M_11, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191711 Cord Blood 0.744 6.4 39889 1141.0 216 973.3 738 25726.3 0.980 title: GSM4182730 Replication_ASD_M_12, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191712 Cord Blood 0.757 5.7 41372 1144.3 209 952.3 855 24730.1 0.977 title: GSM4182731 Replication_ASD_M_13, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191713 Cord Blood 0.758 6.0 41460 1132.2 196 998.7 865 26605.1 0.976 title: GSM4182732 Replication_ASD_M_14, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191714 Cord Blood 0.758 7.4 46657 1049.1 246 992.1 1000 21952.6 0.981 title: GSM4182733 Replication_ASD_M_15, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "male", "study": "MARBLES"}
SRX7191715 Cord Blood 0.742 2.8 31766 1348.9 116 1023.2 301 46784.9 0.966 title: GSM4182734 Replication_ASD_F_01, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191716 Cord Blood 0.780 3.2 36417 1241.4 142 1043.3 489 44280.1 0.987 title: GSM4182735 Replication_ASD_F_02, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191717 Cord Blood 0.753 3.9 36303 1236.8 205 1098.2 544 36396.3 0.984 title: GSM4182736 Replication_ASD_F_03, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191718 Cord Blood 0.754 6.2 40767 1133.8 410 1057.9 787 27005.0 0.978 title: GSM4182737 Replication_ASD_F_04, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}
SRX7191719 Cord Blood 0.768 4.5 39260 1186.4 195 1023.5 737 34534.2 0.983 title: GSM4182738 Replication_ASD_F_05, Homo sapiens, Bisulfite-Seq; {"source_name": "umbilical cord blood", "sample_set": "Replication", "tissue": "umbilical cord blood", "diagnosis": "ASD", "sex": "female", "study": "MARBLES"}

Methods

All analysis was done using a bisulfite sequnecing data analysis pipeline DNMTools developed in the Smith lab at USC.

Mapping reads from bisulfite sequencing: Bisulfite treated reads are mapped to the genomes with the abismal program. Input reads are filtered by their quality, and adapter sequences in the 3' end of reads are trimmed. This is done with cutadapt. Uniquely mapped reads with mismatches/indels below given threshold are retained. For pair-end reads, if the two mates overlap, the overlapping part of the mate with lower quality is discarded. After mapping, we use the format command in dnmtools to merge mates for paired-end reads. We use the dnmtools uniq command to randomly select one from multiple reads mapped exactly to the same location. Without random oligos as UMIs, this is our best indication of PCR duplicates.

Estimating methylation levels: After reads are mapped and filtered, the dnmtools counts command is used to obtain read coverage and estimate methylation levels at individual cytosine sites. We count the number of methylated reads (those containing a C) and the number of unmethylated reads (those containing a T) at each nucleotide in a mapped read that corresponds to a cytosine in the reference genome. The methylation level of that cytosine is estimated as the ratio of methylated to total reads covering that cytosine. For cytosines in the symmetric CpG sequence context, reads from the both strands are collapsed to give a single estimate. Very rarely do the levels differ between strands (typically only if there has been a substitution, as in a somatic mutation), and this approach gives a better estimate.

Bisulfite conversion rate: The bisulfite conversion rate for an experiment is estimated with the dnmtools bsrate command, which computes the fraction of successfully converted nucleotides in reads (those read out as Ts) among all nucleotides in the reads mapped that map over cytosines in the reference genome. This is done either using a spike-in (e.g., lambda), the mitochondrial DNA, or the nuclear genome. In the latter case, only non-CpG sites are used. While this latter approach can be impacted by non-CpG cytosine methylation, in practice it never amounts to much.

Identifying hypomethylated regions (HMRs): In most mammalian cells, the majority of the genome has high methylation, and regions of low methylation are typically the interesting features. (This seems to be true for essentially all healthy differentiated cell types, but not cells of very early embryogenesis, various germ cells and precursors, and placental lineage cells.) These are valleys of low methylation are called hypomethylated regions (HMR) for historical reasons. To identify the HMRs, we use the dnmtools hmr command, which uses a statistical model that accounts for both the methylation level fluctations and the varying amounts of data available at each CpG site.

Partially methylated domains: Partially methylated domains are large genomic regions showing partial methylation observed in immortalized cell lines and cancerous cells. The pmd program is used to identify PMDs.

Allele-specific methylation: Allele-Specific methylated regions refers to regions where the parental allele is differentially methylated compared to the maternal allele. The program allelic is used to compute allele-specific methylation score can be computed for each CpG site by testing the linkage between methylation status of adjacent reads, and the program amrfinder is used to identify regions with allele-specific methylation.

For more detailed description of the methods of each step, please refer to the DNMTools documentation.