Description
A track showing gene models as from liftoff based on GENCODE produced by UW.
Methods
Display Conventions and Configuration
Liftoff was run with the following command using the comprehensive GenCode Release 35 (GRCh38.p13) gff.
liftoff -dir {output.temp} -sc 0.85 -copies -p {threads} -g {input.gff} -o {output.gff} -u {output.unmapped} {input.t} {input.r}
Custom scripts were used to make a bed file from the resulting gff.
Data access
Release history
- 09/08/2020
Contact
Contact Mitchell R. Vollger <mvollger@uw.edu>
Credits
Liftoff: an accurate gene annotation mapping tool, doi: https://doi.org/10.1101/2020.06.24.169680
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