Cactus (simplified) Tracks
 
Cactus Alignment Tracks (simplified) tracks   (All Comparative Genomics tracks)

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 All
hg38 Cactus Chained  hg38 Cactus Chained Alignments  
hg38 Cactus  hg38 Cactus Alignments not chained  
hg38 Cactus Lifted  hg38 Cactus Alignments Lifted from V1.0  

Description

Cactus reference alignments GRCh38 and t2t-chm13-v1.1, with Chimp (GCF_002880755.1/panTro6) as an out-group.

Methods

Standard Cactus alignment portocol

Display Conventions and Configuration

Four tracks are shown:

  • Cactus GRCh38 - alignments of GRCh38 to t2t-chm13-v1.1
  • Cactus CHM13 - self-alignments of t2t-chm13-v1.1
  • Cactus GRCh38 simplified - alignments of GRCh38 to t2t-chm13-v1.1 using PSL display, which is faster to view.
  • Cactus GRCh38 chained - alignments of GRCh38 to t2t-chm13-v1.1 chained alignments

Data access

Release history

Contacts

Credits