Cactus Track Settings
 
Cactus Alignment Tracks   (All Comparative Genomics tracks)

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Organisms
t2t-chm13-v1.1 
GRCh38 
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 Configure 		 t2t-chm13-v1.1  Cactus t2t-chm13-v1.1   Schema 

Description

Cactus reference alignments GRCh38 and t2t-chm13-v1.1, with Chimp (GCF_002880755.1/panTro6) as an out-group.

Methods

Standard Cactus alignment portocol

Display Conventions and Configuration

Four tracks are shown:

  • Cactus GRCh38 - alignments of GRCh38 to t2t-chm13-v1.1
  • Cactus CHM13 - self-alignments of t2t-chm13-v1.1
  • Cactus GRCh38 simplified - alignments of GRCh38 to t2t-chm13-v1.1 using PSL display, which is faster to view.
  • Cactus GRCh38 chained - alignments of GRCh38 to t2t-chm13-v1.1 chained alignments

Data access

Release history

Contacts

Credits