ENC Exon Array Duke Affy Exon Track Settings

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Affymetrix Exon Array from ENCODE/Duke

Track collection: ENCODE Exon Array

Description

All tracks in this collection (2)

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Select subtracks by treatment and cell line: (help)

*Rep*:	1	2	3	4

All	*Treatment*	None	CTCF shRNA knockdown	Randomized shRNA control	Hypoxia, Lactic acidosis	Estradiol 100 nM	Vehicle	IFN-α 4 h	IFN-γ 4 h	Methyltrienolone	Sodium Butyrate	Serum-free media	TGF-β	UT189 E. coli	*Treatment*	All
*Cell Line*															*Cell Line*
GM12878 (Tier 1)															GM12878 (Tier 1)
H1-hESC (Tier 1)															H1-hESC (Tier 1)
K562 (Tier 1)															K562 (Tier 1)
A549 (Tier 2)															A549 (Tier 2)
HeLa-S3 (Tier 2)															HeLa-S3 (Tier 2)
HepG2 (Tier 2)															HepG2 (Tier 2)
HUVEC (Tier 2)															HUVEC (Tier 2)
MCF-7 (Tier 2)															MCF-7 (Tier 2)
8988T															8988T
AoSMC															AoSMC
Chorion															Chorion
CLL															CLL
Colo829															Colo829
Fibrobl															Fibrobl
FibroP AG08395															FibroP AG08395
FibroP AG08396															FibroP AG08396
FibroP AG20443															FibroP AG20443
Gliobla															Gliobla
GM12891															GM12891
GM12892															GM12892
GM18507															GM18507
GM19238															GM19238
GM19239															GM19239
GM19240															GM19240
H7-hESC															H7-hESC
H9ES															H9ES
HEK293T															HEK293T
Hepatocytes															Hepatocytes
HMEC															HMEC
HPDE6-E6E7															HPDE6-E6E7
HSMM															HSMM
HSMM FSHD															HSMM FSHD
HSMMtube															HSMMtube
HSMMtube FSHD															HSMMtube FSHD
HTR8svn															HTR8svn
Huh-7															Huh-7
Huh-7.5															Huh-7.5
iPS CWRU1															iPS CWRU1
iPS NIHi7															iPS NIHi7
iPS NIHi11															iPS NIHi11
LNCaP															LNCaP
Medullo															Medullo
Mel 2183															Mel 2183
Melano															Melano
Myometr															Myometr
NH-A															NH-A
NHEK															NHEK
Osteoblasts															Osteoblasts
ProgFib															ProgFib
Stellate															Stellate
UCH-1															UCH-1
Urothelia															Urothelia
*Cell Line*															*Cell Line*
All	*Treatment*	None	CTCF shRNA knockdown	Randomized shRNA control	Hypoxia, Lactic acidosis	Estradiol 100 nM	Vehicle	IFN-α 4 h	IFN-γ 4 h	Methyltrienolone	Sodium Butyrate	Serum-free media	TGF-β	UT189 E. coli	*Treatment*	All

List subtracks: only selected/visible all ()

	Cell Line^↓1	Treatment^↓2	Rep^↓3	Track Name^↓4
dense Configure	GM12878		1	GM12878 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM12878		2	GM12878 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	GM12878		3	GM12878 Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	H1-hESC		1	H1-hESC Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	H1-hESC		2	H1-hESC Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	H1-hESC		3	H1-hESC Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	H1-hESC		4	H1-hESC Exon array Signal Rep 4 from ENCODE/Duke	Schema
dense Configure	K562	Sodium Butyrate	1	K562 NaBut Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	K562	Sodium Butyrate	2	K562 NaBut Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	K562	Sodium Butyrate	3	K562 NaBut Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	K562	Sodium Butyrate	4	K562 NaBut Exon array Signal Rep 4 from ENCODE/Duke	Schema
dense Configure	K562		1	K562 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	K562		2	K562 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	K562		3	K562 Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	K562		4	K562 Exon array Signal Rep 4 from ENCODE/Duke	Schema
dense Configure	A549		1	A549 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	A549		2	A549 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HeLa-S3	IFN-α 4 h	1	HeLa-S3 IFN-a 4 h Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HeLa-S3	IFN-α 4 h	2	HeLa-S3 IFN-a 4 h Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HeLa-S3	IFN-γ 4 h	1	HeLa-S3 IFN-g 4 h Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HeLa-S3	IFN-γ 4 h	2	HeLa-S3 IFN-g 4 h Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HeLa-S3		1	HeLa-S3 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HeLa-S3		2	HeLa-S3 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HeLa-S3		3	HeLa-S3 Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HepG2		1	HepG2 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HepG2		2	HepG2 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HepG2		3	HepG2 Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HUVEC		1	HUVEC Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HUVEC		2	HUVEC Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	MCF-7	CTCF shRNA knockdown	1	MCF-7 CTCF shRNA knockdown Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	MCF-7	CTCF shRNA knockdown	2	MCF-7 CTCF shRNA knockdown Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	MCF-7	CTCF shRNA knockdown	3	MCF-7 CTCF shRNA knockdown Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	MCF-7	Estradiol 100 nM	1	MCF-7 Estradiol 100 nM Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	MCF-7	Estradiol 100 nM	2	MCF-7 Estradiol 100 nM Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	MCF-7	Hypoxia, Lactic acidosis	1	MCF-7 Hypoxia, Lactic acidosis Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	MCF-7	Randomized shRNA control	1	MCF-7 Randomized shRNA control Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	MCF-7	Randomized shRNA control	2	MCF-7 Randomized shRNA control Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	MCF-7	Randomized shRNA control	3	MCF-7 Randomized shRNA control Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	MCF-7	Vehicle	1	MCF-7 Vehicle Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	MCF-7	Vehicle	2	MCF-7 Vehicle Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	MCF-7		1	MCF-7 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	8988T		1	8988T Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	8988T		2	8988T Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	AoSMC	Serum-free media	1	AoSMC Serum-free media Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	AoSMC	Serum-free media	2	AoSMC Serum-free media Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	AoSMC	TGF-β	1	AoSMC TGFb Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	AoSMC	TGF-β	2	AoSMC TGFb Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	AoSMC		1	AoSMC Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	AoSMC		2	AoSMC Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Chorion		1	Chorion Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	CLL		1	CLL Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	CLL		2	CLL Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Colo829		1	Colo829 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Colo829		2	Colo829 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Fibrobl		1	Fibrobl Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Fibrobl		2	Fibrobl Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	FibroP AG08395		1	FibroP (AG08395) Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	FibroP AG08395		2	FibroP (AG08395) Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	FibroP AG08395		3	FibroP (AG08395) Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	FibroP AG08396		1	FibroP (AG08396) Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	FibroP AG08396		2	FibroP (AG08396) Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	FibroP AG08396		3	FibroP (AG08396) Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	FibroP AG20443		1	FibroP (AG20443) Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	FibroP AG20443		2	FibroP (AG20443) Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	FibroP AG20443		3	FibroP (AG20443) Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	Gliobla		1	Gliobla Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Gliobla		2	Gliobla Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Gliobla		3	Gliobla Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	Gliobla		4	Gliobla Exon array Signal Rep 4 from ENCODE/Duke	Schema
dense Configure	GM12891		1	GM12891 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM12891		2	GM12891 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	GM12892		1	GM12892 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM12892		2	GM12892 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	GM18507		1	GM18507 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM18507		2	GM18507 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	GM18507		3	GM18507 Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	GM19238		1	GM19238 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM19238		2	GM19238 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	GM19239		1	GM19239 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM19239		2	GM19239 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	GM19240		1	GM19240 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	GM19240		2	GM19240 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	H7-hESC		1	H7-hESC Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	H7-hESC		2	H7-hESC Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	H7-hESC		3	H7-hESC Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	H9ES		1	H9ES Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	H9ES		2	H9ES Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	H9ES		3	H9ES Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HEK293T		1	HEK293T Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HEK293T		2	HEK293T Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Hepatocytes		1	Hepatocytes Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Hepatocytes		2	Hepatocytes Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HMEC		1	HMEC Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HMEC		2	HMEC Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HPDE6-E6E7		1	HPDE6-E6E7 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HPDE6-E6E7		2	HPDE6-E6E7 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HSMM		1	HSMM Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HSMM		2	HSMM Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HSMM		3	HSMM Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HSMM FSHD		1	HSMM_FSHD Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HSMM FSHD		2	HSMM_FSHD Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HSMM FSHD		3	HSMM_FSHD Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HSMMtube		1	HSMMtube Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HSMMtube		2	HSMMtube Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HSMMtube		3	HSMMtube Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HSMMtube FSHD		1	HSMMtube_FSHD Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HSMMtube FSHD		2	HSMMtube_FSHD Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	HSMMtube FSHD		3	HSMMtube_FSHD Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	HTR8svn		1	HTR8svn Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	HTR8svn		2	HTR8svn Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Huh-7		1	Huh-7 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Huh-7		2	Huh-7 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Huh-7.5		1	Huh-7.5 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Huh-7.5		2	Huh-7.5 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	iPS CWRU1		1	iPS (CWRU1) Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	iPS CWRU1		2	iPS (CWRU1) Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	iPS NIHi11		1	iPS (NIHi11) Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	iPS NIHi11		2	iPS (NIHi11) Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	iPS NIHi7		1	iPS (NIHi7) Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	iPS NIHi7		2	iPS (NIHi7) Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	LNCaP	Methyltrienolone	1	LNCaP Methyltrienolone Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	LNCaP	Methyltrienolone	2	LNCaP Methyltrienolone Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	LNCaP		1	LNCaP Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	LNCaP		2	LNCaP Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Medullo		1	Medullo Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Medullo		2	Medullo Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Medullo		3	Medullo Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	Mel 2183		1	Mel 2183 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Mel 2183		2	Mel 2183 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Melano		1	Melano Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Melano		2	Melano Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Melano		3	Melano Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	Melano		4	Melano Exon array Signal Rep 4 from ENCODE/Duke	Schema
dense Configure	Myometr		1	Myometr Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Myometr		2	Myometr Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	NH-A		1	NH-A Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	NH-A		2	NH-A Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	NHEK		1	NHEK Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	NHEK		2	NHEK Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Osteoblasts		1	Osteobl Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Osteoblasts		2	Osteobl Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Osteoblasts		3	Osteobl Exon array Signal Rep 3 from ENCODE/Duke	Schema
dense Configure	ProgFib		1	ProgFib Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	ProgFib		2	ProgFib Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Stellate		1	Stellate Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Stellate		2	Stellate Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	UCH-1		1	UCH-1 Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	UCH-1		2	UCH-1 Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Urothelia	UT189 E. coli	1	Urothelia UT189 E. coli Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Urothelia	UT189 E. coli	2	Urothelia UT189 E. coli Exon array Signal Rep 2 from ENCODE/Duke	Schema
dense Configure	Urothelia		1	Urothelia Exon array Signal Rep 1 from ENCODE/Duke	Schema
dense Configure	Urothelia		2	Urothelia Exon array Signal Rep 2 from ENCODE/Duke	Schema